Halodesulfurarchaeum formicicum HTSR1: HTSR_1945
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Entry
HTSR_1945 CDS
T04517
Name
(GenBank) bacterio-opsin activator
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
halh
Halodesulfurarchaeum formicicum HTSR1
Brite
KEGG Orthology (KO) [BR:
halh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
halh03000
]
HTSR_1945
Transcription factors [BR:
halh03000
]
Prokaryotic type
Helix-turn-helix
Other families
HTSR_1945
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Gene cluster
GFIT
Motif
Pfam:
PAS_9
BAT
HTH_10
PAS_3
GAF_2
PAS_4
PAS
PAS_8
GAF_3
GAF
Motif
Other DBs
NCBI-ProteinID:
AOW81107
UniProt:
A0A1D8S6W7
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Position
complement(1858343..1859926)
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AA seq
527 aa
AA seq
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MGETPADERIAELSVEEELHLKEDAMDAAPVGISISDPSLPDNPLIYVNDQFTETTGYER
PEILGTNCRFLQGPETDMDRVAKMAEAVTEQKQVAVELKNYRKDGELFWNRVEIAPIYDE
SGDVAYYVGYQADVTDRKEAELALAAERQTLDHVLSRVTSLVPDIAETIVDSDTRDDLEA
SIAERFATVPDLTAAWVGRYNPSTGLLRPVAGDNRPTEPLGAEDVTGLAAAIDSGTVEVL
TDSTGLFAGMEPPAATALVPLRYRDSVYGLLAVATAEADVFDERETVVLEAIGQSAGAAI
NALERVSLSAGESVIEVRLEVADPAMPLVELADSLSGEVTADGQATISDGQPTLLLTVSD
VPSSSVAEQVKRTGDLKLVAGSESGTVLEWTVPPGPFARSIVQDAVRLEDLSATPSSVRL
TFAAASEHMGNTVVGRFRDGYEGVELLAFHEVADREQSAESFREHVTDDLTGRQLEALQK
AYVSGFFEWPRAVEGESLAAAMDIHPSTFHQHLRAAERKLISAYFDG
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgggggagacgcctgcggacgaacgcatcgcggagctctccgtcgaggaggaactgcac
ctcaaggaggacgccatggacgccgcgccggtcggtatctcgatctccgatccgtcgctc
ccggacaacccgctcatctacgtcaacgaccagtttaccgagaccaccggctacgagcgc
ccggagatcctgggcacgaactgccgattcctgcagggcccggagacggacatggaccgg
gtggcgaagatggccgaggcggtgaccgaacagaaacaggttgccgtcgaactcaagaac
taccggaaggacggcgaactgttctggaaccgcgtcgagatcgccccgatttacgacgag
agcggcgacgtggcgtattacgtgggttatcaggccgacgtcaccgaccgcaaggaggcc
gaactcgcgctcgcggccgaacggcagacgctggatcacgtgctctcccgggtcacctcg
ctggtgccggacatcgccgagacgatcgtcgactcggacaccagggatgacctggaagcc
tcgatcgccgagcgtttcgcgaccgtgccggatctcaccgcggcctgggtcggccgctac
aacccctcgactgggctgttgcgccccgtcgcgggtgataatcgtcctacggagccactc
ggggccgaggatgtcaccggactcgccgccgcgatcgactccggaaccgtcgaagtgctc
acggactcgacgggtttgttcgccgggatggagccccccgccgccaccgcgctcgtgccg
ctccgctaccgtgacagcgtctacggcctgctcgcggtcgcgacggccgaggcggacgtg
ttcgacgagcgggagaccgtcgtcctggaggccatcggtcagtccgccggggccgcgatc
aacgcgctcgaacgggtgagtctctccgccggggagtcggtcatcgaggtcagactggag
gtcgccgatccggccatgccgctggtcgaactcgccgactcgctctcgggtgaggtgacc
gccgacggccaggccaccatctcggacggccagccgacgctcttgctcactgtctcggac
gtcccctcctcatcggtcgccgagcaggtcaagcgaaccggcgatctgaaactggtcgcc
gggagcgaatcggggactgtcctggagtggaccgttcccccggggccgtttgcccgctcg
atcgtccaggacgccgttcgactcgaagacctctcggcgactccgtcgagtgtccggctc
accttcgcggccgcctccgagcacatgggtaacaccgtcgtcgggcgcttccgggacggc
tatgagggggtcgaactgctggccttccacgaggtcgcggaccgcgagcaatcagcggag
agctttcgtgagcatgtgaccgacgatctcactggtcggcaactcgaagccctgcagaag
gcgtatgtcagtggcttcttcgagtggccgcgggccgtcgagggtgagtccctggccgcg
gcgatggacattcacccctcgacgttccaccagcatctccgggccgccgagcgcaaactc
atcagcgcgtacttcgatgggtaa
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