Halodesulfurarchaeum formicicum HTSR1: HTSR_1985
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Entry
HTSR_1985 CDS
T04517
Symbol
dnaN
Name
(GenBank) DNA polymerase sliding clamp
KO
K04802
proliferating cell nuclear antigen
Organism
halh
Halodesulfurarchaeum formicicum HTSR1
Pathway
halh03030
DNA replication
halh03410
Base excision repair
halh03420
Nucleotide excision repair
halh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
halh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HTSR_1985 (dnaN)
03410 Base excision repair
HTSR_1985 (dnaN)
03420 Nucleotide excision repair
HTSR_1985 (dnaN)
03430 Mismatch repair
HTSR_1985 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
halh03032
]
HTSR_1985 (dnaN)
03400 DNA repair and recombination proteins [BR:
halh03400
]
HTSR_1985 (dnaN)
DNA replication proteins [BR:
halh03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
HTSR_1985 (dnaN)
DNA repair and recombination proteins [BR:
halh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
HTSR_1985 (dnaN)
MMR (mismatch excision repair)
Other MMR factors
HTSR_1985 (dnaN)
TLS (translesion DNA synthesis) factors
Other TLS factors
HTSR_1985 (dnaN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCNA_N
PCNA_C
Motif
Other DBs
NCBI-ProteinID:
AOW81147
UniProt:
A0A1D8S710
LinkDB
All DBs
Position
complement(1892638..1893381)
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AA seq
247 aa
AA seq
DB search
MFTAIVSAETLRTTLDSVSVLVDECKIHLTEDGLEIRAVDPANVGMVDLELEAAAFESYE
ADGGIIGVDLSRLEDIAGMADAGQLVQLELDEETRKLHIHIDGLEYTLALIDPDSIRQEP
DLPDLDLPARIVIEGRDIDRAVRAADMVSDHIALGVDTAAEHFYVDAEGDTDDVHLELGP
EDLISLELGEAHSLFSLDYLKDMNKAIPADGEVVVELGEEFPVKFHFDIAEGLGNVTYML
APRIQSE
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgtttacggccatcgtgagcgcagagacgctccggaccacgctcgactccgtgagcgtg
ttggtggacgagtgcaagatccacctcaccgaagacgggctcgaaatccgggcggtcgac
ccggcgaacgtgggcatggttgatctcgaactcgaggccgcggccttcgagtcctacgag
gcggacggcggaatcatcggcgtggacctctcgcgactggaggacatcgccggcatggcc
gatgccggccagctcgtccagctcgaactcgacgaggagacccggaaactccacatccac
atcgacggcctggagtacaccctcgcgctcatcgatcccgactccatccgccaggagccg
gacctccccgacctggaccttcccgcccgcatcgtgatcgagggccgggacatcgaccgc
gccgtacgagcggcggatatggtctccgatcacatcgcgctgggcgtggatacggccgcc
gagcacttctacgtcgacgccgagggcgacaccgacgacgtgcatctggaactcggtccg
gaggatctgatctccctggagctgggcgaggcccactcgcttttctcgcttgactacctc
aaggacatgaacaaggccatcccggccgacggcgaggtcgtcgtcgaactcggcgaggag
ttccccgtgaagttccacttcgacatcgccgagggcctgggcaacgtgacctacatgctc
gcgccccggatccagagcgagtag
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integrated database retrieval system