Halodesulfurarchaeum formicicum HTSR1: HTSR_1992
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Entry
HTSR_1992 CDS
T04517
Name
(GenBank) DNA mismatch repair protein MutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
halh
Halodesulfurarchaeum formicicum HTSR1
Pathway
halh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
halh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HTSR_1992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halh03400
]
HTSR_1992
DNA repair and recombination proteins [BR:
halh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HTSR_1992
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HHH_5
MutS_V
HHH
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
AOW81154
UniProt:
A0A1D8S721
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Position
1899613..1901604
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AA seq
663 aa
AA seq
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MDSMELEAIPGIGPKTREALATLEDPVEALERGDVAAIAAVPGISQGRAVRIVRNAIRHR
HDDPGGFLATDRAEAVYDGLRSLLAERAVTDYGRKRIETFYPSAVPARIAETRAVAERAM
TREFGEPVREALTGLEPLSEPGAVRVRDRCLATTDAETYSRATEAVPELSVELVSDARAL
ADLARGYATVIALDREFTGVEVDGDVRVEPDALENPAELVPERVLAFYGANRESIQAAIE
VHRVANLECELDLDALAGSLSRIEDDGQVSSDAELTRLAAAVDDLEEAVSTAESIANDRL
TEAISETDVTVDGADLLSLAERGAGVDSILARELTQEFDGAIEAARNHLVEALDLQDEEA
TAAARVFPEEPTFPVERNESALSRLEETLTTARDRRAGQVKRELAEELAGAREPVRGLVR
RALELDVEQAISRFAADFDCVMADRSGRGFEIEGGRSPLLAEPPEAVEPVDYAVEDVALL
SGVNSGGKTTTLDMIAAITILAHMGLPVPATAARVPEIEEIHYHAKSSGTLDAGALETTL
RDFASLSAGGATKLVLVDELESITEPGASAKIIAGIIEALQESEATAVIVSHLAAGVREA
CETPVTVDGIRALGLENGELQVKRSPEKDHLARSTPELIVEKLAEGDTEGRTEAFYRALL
EKF
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
gtggactcgatggagctcgaggcgatccccgggatcggcccgaagacccgcgaggcgctt
gccaccctggaggacccggtcgaggccctggagcgcggtgacgtcgccgcgatcgctgca
gtccccggaatctcacaggggcgggccgtccgcatcgtccgaaacgcgattcgtcaccgc
cacgacgatcccggcgggtttctcgcgaccgaccgcgccgaagcggtctacgacggcctg
cgctcgcttttggccgagcgtgccgtgaccgactacggccgaaaacggatcgagaccttc
tatccgagtgcggtgcccgcccgcatcgcggagacccgtgccgtcgccgaacgggcgatg
acgcgagagttcggggagcccgttcgggaggccctgacggggctggaaccgctctccgag
cccggggcggtcagagtacgagaccgctgtctggcgacgaccgacgccgagacctacagt
cgggcgaccgaggcggtcccggagttgagcgtcgagctggtctccgacgcccgggcgctc
gccgacctcgcgcgagggtatgcgaccgtgatcgccctcgaccgggagtttacgggtgtc
gaggtcgacggtgacgttcgagtcgaacccgacgccctggagaatcctgccgagctggtt
ccggagcgagtgctcgccttctatggggcgaaccgcgagtcgattcaggccgcgatcgag
gtgcatcgcgtcgcgaacctggagtgtgaactcgacctggacgcacttgcggggtcgctt
tcccggatcgaggacgacgggcaggtgagttccgacgccgaactgacccggctcgctgcg
gccgtcgatgacctggaggaggccgtctcgacggccgaatcgatcgcgaacgaccggctc
accgaggcgatttcggaaaccgacgtgaccgtcgacggggccgacctgctctcgctggcc
gagcggggagcgggagtggactcgatcctcgcccgggagctgacccaggagttcgatggc
gctatcgaagccgcccggaaccacctcgtggaggcactcgatctccaggacgaggaagcc
accgcggcagcgcgggtcttcccggaggagccgacgtttccggtcgagcgaaacgagtcg
gcgctgtcccgacttgaagagacattgacgaccgcccgggaccgccgggccggacaggtc
aagcgcgagttggccgaggagcttgcgggggctcgcgagccagtccggggactggtccgg
cgggcgctggaactcgacgtcgagcaggccatctcgcgattcgcggcggacttcgattgt
gtgatggccgaccgctctggacgcgggttcgagatcgagggcggtcggtcacccctgctt
gcggaaccgcccgaggccgtcgaaccggtcgattacgcggtcgaggacgtggcgctgctc
tccggagtgaacagcgggggcaagaccacgaccctggacatgatcgccgcgatcacgatc
ctggcccacatggggctacccgtgccggcgaccgcggccagggtgcccgaaatcgaggag
attcactaccacgcaaaatccagtggcaccctcgacgccggcgcgctggagaccacgctc
cgggatttcgcctcgctgtccgcgggcggagcgaccaaactcgtcctcgtggacgaactc
gagagcatcaccgagccgggggcctcggcgaagatcatcgccgggatcatcgaggccctc
caggagagcgaggccacggcggtcatcgtctcccatctcgcggccggggtgcgggaagcc
tgtgagaccccggtcacggtcgacgggattcgggcgctcgggctcgaaaacggcgaattg
caggtcaaacgctccccggagaaagaccacctggcccgttcgacacccgagttgatcgtc
gagaaactggcagagggagacaccgagggcaggacggaagcgttctaccgggcgctgctc
gaaaagttctga
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