Halodesulfurarchaeum formicicum HTSR1: HTSR_2051
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Entry
HTSR_2051 CDS
T04517
Name
(GenBank) DEAD/DEAH box helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
halh
Halodesulfurarchaeum formicicum HTSR1
Pathway
halh03022
Basal transcription factors
halh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
halh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HTSR_2051
09124 Replication and repair
03420 Nucleotide excision repair
HTSR_2051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halh03021
]
HTSR_2051
03036 Chromosome and associated proteins [BR:
halh03036
]
HTSR_2051
03400 DNA repair and recombination proteins [BR:
halh03400
]
HTSR_2051
Enzymes [BR:
halh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
HTSR_2051
Transcription machinery [BR:
halh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HTSR_2051
Chromosome and associated proteins [BR:
halh03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
HTSR_2051
DNA repair and recombination proteins [BR:
halh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HTSR_2051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
SLFN-g3_helicase
DUF6594
ATPase
Zot
nSTAND3
GvpD_P-loop
AAA_25
AAA_30
HBB
AAA_34
NDC80_loop
Mg_chelatase
TPR_MLP1_2
Motif
Other DBs
NCBI-ProteinID:
AOW81211
UniProt:
A0A1D8S777
LinkDB
All DBs
Position
1945814..1947985
Genome browser
AA seq
723 aa
AA seq
DB search
MAAEYERFFPKPEPYPNQAEAMDVIADALEVGRDVLFEGAPGTGKTLAALAPSLAYAREH
DKTVVITTNVHQQMHQFVEEAREIHAETPIRSAVFKGKSSMCHIDVGYEECQVLRDTTRD
LVELEEELDELKDRERRLLDQAQAGSESATEKRQSVLEEIEALEEQRANLEDSNTCEHYR
TNLTRAGDAFVSWLFDDVRTPTEVYSYAEQQGVCGYERLKEGLDGVELVVANYHHLLDPV
IRSQFFRWLDRDPEDVIAVFDEAHNVEDAARDHATRTLTENTLAEAANEAGDVEDSRADA
ALRIIQPFQDALIETYEANLGFGDRERVGSTWQDVPVANETGRDDLTRAFLDRYTGPGIS
TDLDEALKLGTALDEEYETAYREGDADTRRESQTLAAADFIEGYLEEGDETGQYPTLGIR
RDESTNEVYGRAELFNCIPREVTETLFEEVHATVLMSATLRPFDVLSEVLGLDDPAELAF
GLTFPEQNRRTFAVDVPPLFASRRDDPGIQEVLTDTLSDVVRCTPGNTLLFFPSYAEAER
YYDRLSGALDATLFLDEPGVAVEEKRQSFVERTDGVLFTSLWGTLAEGVSFDGDDARSVA
VVGVPYPRLDERSEAIQDAYDEVFGDREPEAGWRYAVEIPTVRKTRQALGRVIRSPSDIG
VRALIDRRYTPASRTQLPDYTVNPDFPPEERAELIDVEPSKLKYAMLNFFRDRDAWDGQP
PTP
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
gtggcagccgagtacgaacggttcttcccgaaacccgagccctacccgaatcaggccgag
gcgatggacgtcatcgccgacgccctggaggtcggccgggacgtgctcttcgagggggcc
ccgggcaccgggaagaccctcgccgccctggcaccgtcactcgcgtacgcgcgggaacac
gacaagaccgtcgtcatcacgacgaacgtccaccagcagatgcaccagttcgtcgaggag
gcccgcgagatccacgccgagacgcccatccggagtgccgtgttcaagggcaagtcctcg
atgtgtcacatcgacgtgggctacgaggagtgtcaggtcctgcgggataccacccgggat
ctggtcgaactcgaggaagaactcgacgaactcaaagatcgcgaacgacggctgctcgat
caggcccaggccggctcggagtcggcgaccgagaagcgccagtcggtcctcgaagagatc
gaagcgctcgaagaacagcgggcgaacctggaggactcgaacacctgtgagcactaccgg
acgaacctgacccgggcgggggacgcctttgtctcctggctctttgacgacgtgcgcacg
ccgacggaagtctatagctacgccgagcaacagggtgtctgtggctacgagcgcctcaaa
gaggggctggacggcgtcgagttggtcgtggcgaactaccaccacctcctcgatccggtc
atccgcagccagttcttccggtggctcgaccgggaccccgaggacgtgatcgcggtcttc
gatgaggcacacaacgtcgaggacgccgcccgggaccacgccaccagaacgctgaccgag
aacacgctggcggaggccgcaaacgaggccggggatgtcgaggactcgcgggccgacgct
gcactccggatcatccaacccttccaggacgccctgatcgagacctacgaggcgaatctg
gggttcggcgaccgggagcgggtcgggtccacctggcaggacgtgccggtcgcgaacgag
actggccgggacgatctgacacgggcgttcctcgaccgctataccggccccgggatcagc
acggatctggacgaggcgctgaaactcgggacggctctggacgaggagtacgagacggcc
taccgggagggagacgccgacacccgtcgggagtcccagacactcgctgcggcggacttc
atcgagggctacctggaagagggcgacgagaccgggcagtaccccacactcggcatcaga
cgtgacgagtcgacgaacgaggtctacggccgcgcggagcttttcaactgcatcccgcgt
gaggtgaccgagacgctcttcgaggaggttcacgcgacggtcctgatgagcgcgaccctg
cgacccttcgacgtgctctcggaggtcctcggactcgatgaccccgccgaactcgccttc
gggctgaccttccccgaacagaaccgccggacgttcgcggtcgacgtgccgccgcttttc
gccagccggcgggatgatcccggcatccaggaggtcctcacggacaccctctcggacgtg
gtccggtgcacccccgggaacacgctgctctttttccccagttacgccgaggccgagcgg
tactacgaccgactctcgggggcactcgacgccacgctcttcctcgacgagccgggggtc
gccgtggaggagaagcgacagtccttcgtcgagcggacggacggcgtgctgttcacctcc
ctctggggcacgctcgcggagggggtcagcttcgacggcgacgacgcccggtcggtcgcg
gtcgtcggcgtcccgtatccccgcctcgacgagcgcagcgaggccatccaggatgcctac
gacgaggtgttcggcgaccgcgagcccgaggccggctggcgctacgccgtcgagatcccc
acggtcaggaagacccgacaggcactgggacgggtgatccgatcgccctccgatatcggc
gtccgggcgctcatcgatcgccgctacacgccagcatcccggacacagctcccggactac
acggtcaatcccgacttcccgcccgaggaacgggccgagctgatcgacgtcgagccgagc
aagctgaagtacgcgatgttgaacttcttccgggaccgggacgcctgggacggacagccg
ccgacgccctga
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