Halorientalis sp. IM1011: BV210_01795
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Entry
BV210_01795 CDS
T04693
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
hali
Halorientalis sp. IM1011
Brite
KEGG Orthology (KO) [BR:
hali00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hali03016
]
BV210_01795
Enzymes [BR:
hali01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
BV210_01795
Transfer RNA biogenesis [BR:
hali03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
BV210_01795
Prokaryotic type
tRNA splicing ligases
BV210_01795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AQL41522
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All DBs
Position
345020..346483
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AA seq
487 aa
AA seq
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MTTYDADGITLEKVRDYVWEIPQEGGMNVPARVLASEALLEEIQQDKTLQQLKNSAHLPG
VRKHAICMPDGHQGYGFPVGGVAGIDVEDGCISPGAIGYDINCGVRMMRTNLTYDDLQGR
EEELVETLFSNIPSGLGGGGVVQTDGDGIEAILERGMDWALEEGWAVEDDLAHCEDEGHR
PEANAAKVSKKAKDRGANQVGSLGSGNHFLEVQRVTDVFREDVGEAFGLQEDQIVVLIHC
GSRGLGHQICTDYLRDIEQAHQGLLNQLPDKELAAAPAGSQLAEDYYEAMCAAINFAWVN
RQLIMHRTRQVFERVFDRDWQAMEMDLLYDVAHNIGKKEVHTVEDGEERELFVHRKGATR
AFPAGRPEVPAAYADVGQPIIIPGSMGAGSYVLRGGEQSLEETFGSTAHGAGRLMSRTQA
KNEYWGEDVRDDLREQNEIYVKAQSGATIAEEAPGVYKDVDEVVRVSDALGIGDKVARTY
PVCNIKG
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaccacctacgacgccgacggcatcacgctcgaaaaggtacgggactacgtctgggag
attccacaggaaggcgggatgaacgtgcccgcccgggtgctcgcaagcgaggcactcctc
gaagagatccagcaggacaagaccctccagcaactgaagaactcggcgcacctcccgggc
gtgcgcaaacacgccatctgcatgcccgacggccaccagggctacggcttccccgtcggc
ggcgtcgccggcatcgacgtcgaggacggctgtatctcgcccggagcgatcggctacgac
atcaactgcggcgtccggatgatgcggacgaacctgacctacgacgacctgcagggccgc
gaggaggaactcgtcgagaccctgttcagcaacattccgtcggggctcggcggcggcggc
gtggtccagaccgacggcgacgggatcgaggcgattctcgaacgcgggatggactgggcg
ctcgaagagggctgggcggtcgaggacgatctggcccactgcgaggacgagggccacaga
ccggaggcgaacgccgcgaaagtctcgaagaaggccaaagaccggggcgcgaatcaggtc
gggtcgctcggatcgggcaaccacttcctcgaagtccagcgcgtgaccgacgtgttccgc
gaggacgtgggcgaggccttcggcctgcaggaggaccagatcgtcgtcctgatccactgt
ggctcgcgcgggctgggccaccagatctgtacggactacctccgcgacatcgagcaggcc
catcagggattgttgaaccagttgccggacaaggaactcgcggccgcgccggccggttcg
caactggccgaagactactacgaggcgatgtgtgccgcgatcaacttcgcgtgggtgaac
cgccagctcatcatgcaccgcacgcggcaggtgttcgagcgcgtcttcgaccgcgactgg
caggccatggagatggacctgctgtacgacgtggcccacaacatcggcaagaaggaggtc
cacaccgtcgaggacggtgaggagcgcgagctgttcgtccaccggaagggagcgacgcgg
gccttccccgccggtcggcccgaggtccccgccgcgtacgcggacgtgggccagccgatc
atcatccccgggagcatgggcgctggtagctacgtcctccggggcggcgagcagtccctc
gaggagacgttcggctcgacggcccacggtgcgggccggctgatgagccgcacgcaggcg
aaaaacgagtactggggcgaggacgtgcgcgacgacctccgcgaacagaacgagatctac
gtcaaggcccagtccggcgcgaccatcgccgaggaagcgcccggcgtctacaaggacgtg
gacgaggtcgtccgggtctcggacgcgctgggcatcggggacaaggtcgcccggacgtac
ccggtctgtaacatcaaggggtag
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