Halorientalis sp. IM1011: BV210_02120
Help
Entry
BV210_02120 CDS
T04693
Name
(GenBank) transcription initiation factor IIB 2
KO
K03124
transcription initiation factor TFIIB
Organism
hali
Halorientalis sp. IM1011
Pathway
hali03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hali00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BV210_02120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hali03021
]
BV210_02120
Transcription machinery [BR:
hali03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
BV210_02120
Prokaryotic type
Archaeal type
TFB
BV210_02120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Zn_ribbon_tTFIIB
A2L_zn_ribbon
Zn_ribbon_RRN7
DZR
Zn_ribbon_PaaD
Zn_ribbon_3
Zn_ribbon_IS1595
Auto_anti-p27
DUF8106
Motif
Other DBs
NCBI-ProteinID:
AQL41582
LinkDB
All DBs
Position
405117..406103
Genome browser
AA seq
328 aa
AA seq
DB search
MTDTTIREYTGERERTREDGDETEEREREEPVVCPECGGSLVTDSERGETVCEECGLVVS
EDEVDPGPEWRAFDAKEKDEKSRVGAPTTNMMHDKGLSTNIGWQDKDAYGNSLSSRQREK
MQRLRTWNERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALDEDLLPG
RSIEGVSTASLYAAARQAGTPRSLDEIESVSRVDKDEIARTYRYVVRELNLEIQPADPES
YVPRFASDLDLSEEVERRARELLSSAKEQGVHSGKSPVGLAAAAVYAASLLANEKVTQSA
VSEVASISEVTIRNRYHELLEAEDTVAQ
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgacagacaccaccatcagagagtatacgggcgagcgcgagcgcacgcgcgaagacgga
gatgagacggaggagcgggagcgcgaagagccggtcgtctgtccggagtgtggcggttcg
ctcgtgaccgactcggagcgtggcgagacggtctgtgaggagtgtggactggtcgtctcc
gaggacgaagtcgatcccggaccggagtggcgcgccttcgacgccaaggagaaagacgag
aagagccgggtcggggccccgaccacgaacatgatgcacgacaaggggctctcgaccaac
atcggctggcaggacaaggacgcctacggcaactccctgtcctcgcgccagcgcgagaag
atgcagcggctgcgcacctggaacgagcggttccgcacccgcgactccaaggagcgcaac
ctcaagcaggcactcggcgagatcgaccgcatggcttccgcactgggtctccccgagaac
gtccgcgagaccgcctcggtcatctaccgccgggcactcgacgaggacctcctccccggt
cggtccatcgagggcgtctcgacggcctcgctgtacgccgccgcccgacaggccggcacg
ccccgcagtctcgacgagatcgaatcggtctcccgggtcgacaaggacgagatcgcacgc
acctaccgctacgtcgtccgggaactgaacctggagatccagcccgcagatcccgagagc
tacgtcccccgcttcgcctcggatctcgacctctccgaggaggtcgagcgccgggcccgg
gaactgctgagttcggccaaagagcagggcgtccactccgggaagtccccggtcgggctg
gccgcggcggccgtctacgccgcctcgctgctggccaacgagaaggtgacccagtcggcg
gtctccgaggtcgcctccatctccgaggtcaccatccgcaaccgctaccacgaactgctg
gaagccgaggataccgtcgcgcagtaa
DBGET
integrated database retrieval system
