Halorientalis sp. IM1011: BV210_03840
Help
Entry
BV210_03840 CDS
T04693
Name
(GenBank) transcription elongation factor Spt5
KO
K15172
transcription elongation factor SPT5
Organism
hali
Halorientalis sp. IM1011
Pathway
hali03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hali00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
BV210_03840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hali03021
]
BV210_03840
03019 Messenger RNA biogenesis [BR:
hali03019
]
BV210_03840
Transcription machinery [BR:
hali03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
BV210_03840
RNA polymerase I system
BV210_03840
Messenger RNA biogenesis [BR:
hali03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
BV210_03840
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt5-NGN
KOW
Ribosomal_uL24m-like
KOW4_SPT5
SH3_KIN17_C
DUF6093
KOW2_Spt5
Glyco_hydro_65C
Motif
Other DBs
NCBI-ProteinID:
AQL41898
LinkDB
All DBs
Position
complement(754095..754532)
Genome browser
AA seq
145 aa
AA seq
DB search
MGIFAVKTTASQERTVADMIMNREEPSIHAALAPDSLTSYVMVEADDAAVFERISDEIPH
MRGVVQGKSSIAEVEHFLSPKPDVEGIAEGDIVELIAGPFKGEKAQVQRIDESKDQVTVE
LYEATVPIPVTVRGDQIRVLDSEER
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atgggtatcttcgctgtcaaaaccacggccagtcaggaacgcaccgtcgcggacatgatc
atgaaccgcgaggagccgtcgatccacgcggccctcgcgcccgacagcctcacaagctac
gtgatggtcgaggccgacgacgccgccgtcttcgagcgcatctccgacgagattccgcac
atgcgcggggtcgtccaggggaaaagttccatcgccgaagtcgaacacttcctctcgccg
aaacccgacgttgaggggatcgccgagggcgacatcgtcgaactcatcgccggcccgttc
aagggcgagaaggcccaggtccagcgcatcgacgagtccaaagatcaggttaccgtcgag
ctgtacgaggcgacggtcccgattccggtcaccgtccgcggtgaccagattcgcgtcttg
gatagtgaggagcgctga
DBGET
integrated database retrieval system
