Halorientalis sp. IM1011: BV210_04250
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Entry
BV210_04250 CDS
T04693
Name
(GenBank) transcription initiation factor IIB 3
KO
K03124
transcription initiation factor TFIIB
Organism
hali
Halorientalis sp. IM1011
Pathway
hali03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hali00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BV210_04250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hali03021
]
BV210_04250
Transcription machinery [BR:
hali03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
BV210_04250
Prokaryotic type
Archaeal type
TFB
BV210_04250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Zn_ribbon_LysW
Zn_Ribbon_YjdM
A2L_zn_ribbon
Cyclin_N
Cyclin_C
Zn_ribbon_tTFIIB
Sigma70_r4
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-ProteinID:
AQL41976
LinkDB
All DBs
Position
834725..835696
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AA seq
323 aa
AA seq
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MTRSTRQREREREAETETESTDEEGVRACPECESDNLVKDADRGELICDDCGLVVEDENI
DPGPEWRAFNHQERQEKSRVGAPTTKTMHDKGLTTTIDWKDKDAYGRSISSKKRSQMHRL
RKWQERIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALSEDLIRGRSIE
GVATSALYAACRKEGIPRSLEEISEVSRVERKEIGRTYRYISQELGLEMEPVDPKKYVPR
FCSELDLSEEVQSKANEIIETTAEKGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVADV
AQVTEVTIRNRYQEQIEAMGIHS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgacacggtccacccgtcagcgggagcgcgagcgcgaggccgagaccgaaactgaatcc
acggatgaagagggggtgcgtgcctgtccggagtgtgagtcggacaatctggtcaaagat
gccgaccgtggggagttgatctgtgacgactgtggcctggtcgtcgaggacgagaatatc
gatcccgggccggagtggcgggcgttcaaccatcaggaacgacaggagaaatcgagggtc
ggtgccccgacgacgaagacgatgcacgacaaggggctgacgaccaccatcgactggaag
gacaaggacgcctacgggcgctccatctcctcgaagaagcgcagccagatgcaccgcctg
cgcaagtggcaggagcgcatccggacgaaagacgccggcgagcgcaacctccagttcgcg
ctctcggagatcgaccgcatggcctccgcactcggtgtgccccgctcggttcgggaggtc
gcctcggtcatctatcggcgagccctgagcgaggacctcatccgggggcgctccatcgag
ggcgtcgccacgagcgctctctatgcggcctgtcggaaggaggggatcccgcgcagtctc
gaagagatttccgaggtatcacgcgtcgaacgcaaggagatcggccgtacctatcgctac
atcagccaggaactcggactggagatggaaccggtcgaccccaagaagtacgtcccccga
ttttgctccgaactcgatctcagcgaggaggtccagtcgaaggccaacgagatcatcgag
acaaccgccgagaagggcctgctctcgggcaagtccccgaccggctacgcggccgccgcc
atctacgccgcctccctgctctgtaacgagaagaagacccagcgcgaggtcgccgacgtc
gcccaggtcaccgaggtcaccatccggaaccgctatcaggaacagatcgaagcgatgggc
atccacagttag
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