Halorientalis sp. IM1011: BV210_04365
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Entry
BV210_04365 CDS
T04693
Name
(GenBank) transcription initiation factor IIB 2
KO
K03124
transcription initiation factor TFIIB
Organism
hali
Halorientalis sp. IM1011
Pathway
hali03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hali00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BV210_04365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hali03021
]
BV210_04365
Transcription machinery [BR:
hali03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
BV210_04365
Prokaryotic type
Archaeal type
TFB
BV210_04365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Zn_ribbon_PaaD
Anti-TRAP
Sigma70_r4
A2L_zn_ribbon
Zn_ribbon_LysW
HTH_Tnp_ISL3
Zn_ribbon_RPB9
Cyclin_C
Zn_ribbon_Top1
Lar_restr_allev
DmmA-like_C
Motif
Other DBs
NCBI-ProteinID:
AQL41998
UniProt:
A0A1Q1FGP5
LinkDB
All DBs
Position
complement(856474..857445)
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AA seq
323 aa
AA seq
DB search
MSENTRARTRTTDEKTAEETDEEEEVDCPECGGHLVMDNEHGETVCEDCGLVVEEDEIDR
GPEWRAFDASEKDEKSRVGAPTTNMMHDKGLSTNIDWRDKDAYGNSLGSRQRQKMQRLRK
WNERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALDEDLLPGRSIEGV
STASVYAAARQAGVPRSLDEITDVSRVEKSEIARTYRYVVRELGLEVKPADPESYVPRFA
SSLELSDEAEHRARQLLQNAKEQGVHSGKSPVGLAAAAVYAAALLTNEKTTQAAVSEVAD
ISEVTIRNRYHELLEAEQDLPMA
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagaacacgagagcgcgaacgcgcacgaccgacgagaagacagcagaggagacc
gacgaggaagaagaagtagactgcccggagtgcggtgggcacctcgtcatggacaacgaa
cacggtgagacggtctgtgaagactgcggactggtcgtcgaagaagacgagatcgaccgc
gggccggagtggcgcgcgttcgacgccagcgagaaggacgagaaatcccgtgtcggagcc
ccgaccacgaacatgatgcacgacaaggggctctcgaccaacatcgactggcgcgacaag
gacgcctacggtaactcgctgggcagccgccagcgccagaagatgcagcgcctccggaag
tggaacgagcggttccggacccgggactccaaggagcgcaacctcaagcaggcactcggc
gagatcgaccgcatggcctccgcgctcggcctccccgagaacgtccgcgaaacggcgtcg
gtcatctaccgtcgggcactcgacgaggacctcctgcccggccgttccatcgagggcgtc
tcgacggcctcggtctacgccgcggcccgacaggccggcgtcccgcgcagtctcgacgag
atcaccgacgtttcgcgggtcgagaagagcgagatcgctcgcacctaccgctacgtcgtg
cgcgaactcgggctggaagtcaagcccgccgaccccgagagctacgtgccccgcttcgcc
tcgtcgctcgaactctccgacgaggccgaacaccgcgcccgccagctcctccagaacgcc
aaggaacagggcgtccactccgggaagtccccggtcggactcgccgccgcagccgtctac
gcggctgccctgctgaccaacgagaagaccacgcaggccgccgtgagcgaggtcgcggac
atctccgaggtcaccatccgtaaccgctaccacgaactgctggaggccgagcaggacctc
ccgatggcctga
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