KEGG   Halorientalis sp. IM1011: BV210_05350
Entry
BV210_05350       CDS       T04693                                 
Name
(GenBank) transcription initiation factor IIB
  KO
K03124  transcription initiation factor TFIIB
Organism
hali  Halorientalis sp. IM1011
Pathway
hali03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hali00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    BV210_05350
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hali03021]
    BV210_05350
Transcription machinery [BR:hali03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     BV210_05350
 Prokaryotic type
  Archaeal type
    TFB
     BV210_05350
SSDB
Motif
Pfam: TFIIB Zn_Ribbon_TF RB_B DUF8055 DUF7573 Cyclin_C DZR_2
Other DBs
NCBI-ProteinID: AQL42171
LinkDB
Position
1049413..1050318
AA seq 301 aa
MGGVNDGVACTECGGTVRRTGTETVCGDCGLVVDEDAIDRGPEWRSLDGEGDERRTGAPL
TRARHDKGLSTEIGYGTGSEVSGRRQRQLVRMRRQHNRARLSSKRERNRLYAFTEIRRIV
SVLGLPTTIREQACSLFESAQSEDLLCGRSLEGFAAAGVYATCRTNSIARTMDEIVDDAR
ADRNELKAAYDALNRELGLPVGPIDPTDYLPRYASELGVEADVESRAREYAVLLVETGRM
GGKNPSGVAAACLYKAAYDHGVEVTQTRAADLADVSRMTIRSTVTDLKTLRQAEEVDRSV
E
NT seq 906 nt   +upstreamnt  +downstreamnt
atgggtggtgtaaacgacggtgttgcctgcaccgagtgtggaggaacggtacgacggaca
gggacggaaacggtctgtggcgactgcggactggtggtcgacgaggacgcgatcgatcgg
gggccggagtggcgctcgctcgacggggagggtgacgaacggcgaacgggtgcgccgctg
acgcgggcccgtcacgacaaggggctgtcgaccgagatcggttacgggactggatcggag
gtctcgggccggcgacagcgccagctcgtccggatgcgccgccagcacaaccgggcgcgg
ctctcctcgaaacgggaacgcaaccggctgtacgccttcaccgaaatccggcggatcgtg
tcggtactggggttgccgacgacgatccgcgagcaggcctgttcgctgttcgagtcggcc
cagtccgaggatctgctctgtggccggtcgctggaagggttcgcggcggcgggcgtgtac
gcgacctgccgaaccaactcgatcgcccggacgatggacgagatcgtcgacgacgcccgc
gccgatcggaacgaactcaaggccgcctacgacgccctgaaccgcgaactcggcctcccg
gtgggcccgatcgatccgaccgactacctcccccggtacgcctccgaactcggagtggaa
gccgacgtcgagagtcgggcgcgggagtacgccgtcttgctcgtcgagaccggccgcatg
ggcgggaagaacccgagcggcgtcgcggccgcctgtctctacaaggcggcctacgaccac
ggtgtcgaggtgactcagacccgggcagccgacctcgcggacgtgtcccggatgacgatc
cgctcgacggtcaccgacctgaaaaccctccgacaggccgaggaggtcgaccgctccgtc
gagtag

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