Halorientalis sp. IM1011: BV210_06475
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Entry
BV210_06475 CDS
T04693
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
hali
Halorientalis sp. IM1011
Pathway
hali03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hali00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BV210_06475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hali03019
]
BV210_06475
03016 Transfer RNA biogenesis [BR:
hali03016
]
BV210_06475
Enzymes [BR:
hali01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
BV210_06475
Messenger RNA biogenesis [BR:
hali03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BV210_06475
Transfer RNA biogenesis [BR:
hali03016
]
Prokaryotic type
tRNA degradation factors
BV210_06475
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
AQL42381
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All DBs
Position
complement(1292391..1293695)
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AA seq
434 aa
AA seq
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MSDQAEAGTAEGQGPVEIDEEMARHLANKREELFEKFDIRDDFPPAVRQEADELTDDVQS
EVESELDDREDLRELTTWTTDPVDAQDFDDAISIDVREDEIVLWVHIADVTHYVNPETEM
WSEALKRANTVYLPAYTVHMLPPILAETVCSLVPHEDRLAHTVEMHLDPETLSYETIDIY
KSVIRSDARLTYAQAESLLDDPESADDLLEDPEVDLATKCEQVWDLADRLHEQRKEDGSL
VLNPRRDRAHTIIEECMLKANKAVTHTLQWDRGLEAMYRVHPQPTPDQWNEALQEIQDLD
GVSVSASHEDPRKAVNETLEEAPERQLNQIQRAVMKVMPRAKYMSDPFGGHHALNFEIYG
HFTSPIRRLSDLVNHWIVYTDEVPADLGDLCSHASDKQKDGEQAEREYRKFLEEVGLDPA
AVNNRGVEVVDEDD
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccaggcagaggccgggaccgcggaaggccagggccccgtcgagatcgacgag
gagatggcccgccacctcgccaacaagcgcgaggaactgttcgagaagttcgacatccgc
gacgacttcccgcctgccgtccgccaggaggcggacgaactgaccgacgacgtacagagc
gaggtcgagtcggaactcgacgaccgcgaggacctccgggagctaaccacctggacgacc
gaccccgtcgacgcacaggacttcgacgacgccatctccatcgacgtgcgcgaggacgag
atcgtcctctgggtccacatcgccgacgtgacccactacgtcaaccccgagaccgagatg
tggtcggaggctctcaaacgagccaacaccgtctacctgcctgcctacacggtccacatg
ctcccgccgatcctcgccgagaccgtctgctcgctggtcccccacgaggaccgcctggcc
cacaccgtcgagatgcatctggatcccgagacgctctcctacgagaccatcgacatctac
aagtccgtcatccgcagcgacgcccggctcacctacgcccaggccgagtcactgctggac
gaccccgagagcgcagacgacctgctggaagaccccgaggtcgacctcgcgaccaagtgc
gaacaggtctgggacctcgccgaccgcctccacgaacagcgcaaggaagacggatcgctg
gtgctcaacccccgccgggaccgggcccacaccatcatcgaggagtgcatgctgaaggcc
aacaaggccgtcacgcacaccctccagtgggaccggggtctggaagcgatgtaccgcgtc
cacccacagcccacgcccgaccagtggaacgaggccctccaggagattcaggatctggac
ggcgtctccgtgtcggccagccacgaggacccccgcaaagccgtcaacgagacgctggag
gaagcgcccgagcgccagctcaaccagattcaacgggccgtgatgaaggtcatgccccgc
gcgaagtacatgagcgaccccttcggcggccaccacgccctgaacttcgagatctacggc
cacttcaccagccccatccggcggctctcggacctcgtcaaccactggatcgtctacacc
gacgaggtgcccgccgacctcggcgacctctgttcgcacgcctccgacaagcagaaagac
ggcgagcaggccgaacgcgagtaccgcaagttcctcgaagaagtgggactggaccccgcc
gcggtcaacaatcgtggggtcgaagtggtcgacgaagacgactaa
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