Halorientalis sp. IM1011: BV210_06675
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Entry
BV210_06675 CDS
T04693
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
hali
Halorientalis sp. IM1011
Pathway
hali03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hali00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BV210_06675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hali03021
]
BV210_06675
Enzymes [BR:
hali01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BV210_06675
Transcription machinery [BR:
hali03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
BV210_06675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
RNA_pol_Rpb1_5
HTH_3
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AQL42416
LinkDB
All DBs
Position
complement(1334320..1337238)
Genome browser
AA seq
972 aa
AA seq
DB search
MSQHAPKEIGELSFGLMDPEEYRDMSATKVITADTYDDDGFPIDMGLMDPRLGVIDPGLE
CKTCGKHSGSCNGHFGHIELAAPVIHVGFAKLIRRLLRGTCRECSRLCLNDEEREEFTSR
LRRTRELGNDLNDVTKAAIRQARKKDHCPFCGEQQYDINHEKPTTYYEVQQVLSAEYPDL
IAEAMEPDPDDEDDRGTSPVELADDTGIDQSRIQEILSGEFRPREEDRKAIERALDVDLT
EEDMNKLMPSDIRDWFEAIPDEDIEVLGINAERSRPEWMILTVLPVPPVTARPSITLDNG
QRSEDDLTHKLVDIIRINQRFMENREAGAPQLIIEDLWELLQYHVTTFMDNEISGTPPAR
HRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSARTVISPDPTLSLNEVGVPDRVATEMT
QTMNVNERNLEEARRYVSNGPEAHPGANYVKRPDGRRLKVTEKNCEELAEKVEPEWEVSR
HLVDGDIIIFNRQPSLHRMSIMAHEVVVMPYKTFRLNTTVCPPYNADFDGDEMNMHALQN
EEARAEARVLMRVQEQMLSPRFGENIIGAIQDHISGTYLLTNQNPQFNETQALDLLRATR
IDELPEPDGTDEAGNEYWTGRTVFSELLPDELNLEFVSSAGDDVVIEEGQLVEGTIDEDA
VGAFGGEIVDTIAKVYSKTRARIFVNEVASLAMRSIMHFGFSIGIDDESISPAAEEQIDE
AIENAYARVQELIDTYDRGELESLPGRTVDETLEMKIMQTLGKARDSAGDIAEEHFDDDN
PAVVMAESGARGSMLNLTQMAGCVGQQAVRGERINRGYEDRTLSHYKPDDLSAEAHGFVE
HSYRGGLNPREFFFHAMGGREGLVDTAVRTSKSGYLQRRLINALSELETQYDGTVRDTSD
TIVQFEFGEDGTSPVKVSSSEDNDIDVDRIADRVLDTEFDSDEAKQEFLGKERSPTNLSE
HADDWWMAQSDD
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcacgcacccaaagagatcggcgaactcagcttcgggctgatggaccccgag
gagtatcgggacatgagcgccacgaaggtcatcacggccgacacctacgacgacgacggg
ttccccatcgacatgggcctgatggacccgcgactcggcgtgatcgaccccggactggag
tgtaagacctgcgggaaacactccgggtcctgtaacggccacttcggccacatcgaactc
gcggcccccgtcatccacgtgggcttcgcgaagctcatccggcggctcctgcgcgggacc
tgtcgtgagtgttcgcggctctgtctcaacgacgaggaacgcgaggagttcacgagccga
ctccgccgcactcgcgaactcggaaacgacctcaacgacgtgaccaaggccgccatccgg
caggcccgcaagaaggaccactgcccgttctgcggcgaacagcagtacgacatcaaccac
gagaagccgacgacctactacgaggtccagcaggtcctctccgccgagtacccggacctg
atcgcggaagcgatggaaccggatcccgacgacgaggacgaccgcgggacctccccggtc
gaactcgccgacgacaccgggatcgaccagagccggatccaggagatcctctccggcgag
ttccgcccgcgcgaggaggaccgcaaggcaatcgagcgcgcgctggacgtggacctcacc
gaggaggacatgaacaagctgatgccctccgacatccgggactggttcgaggccatcccg
gacgaggacatcgaggtgctcggcatcaacgccgagcgctcccggcccgagtggatgatc
ctcaccgtgttgccggtaccgccggtcacggcccggccctcgatcacgctggacaacggc
cagcgctccgaggacgacctcacgcacaagctggtcgacatcatccggatcaaccagcgg
ttcatggagaaccgcgaggccggtgccccccagctgatcatcgaggacctctgggaactg
ctccagtaccacgtcaccaccttcatggacaacgagatcagcgggacgccgccggcccga
caccgttccggccggccgctcaagaccctctcccagcggctgaagggcaaggagggtcgc
ttccgcggctcgctgtccgggaagcgggtcaacttctcggctcgtacggtgatctcgccg
gacccgaccctctcactgaacgaggtcggtgtgcccgaccgggtcgcgaccgagatgacc
cagacgatgaacgtcaacgagcgcaacctggaggaggcacggcgctacgtctccaacgga
ccggaagcccatccgggcgcgaactacgtcaaacggccggacggccgtcgcctcaaggtg
accgagaagaactgcgaggaactggcggagaaggtcgaacccgagtgggaagtctcccga
cacctggtcgacggggacatcatcatcttcaaccggcagccgtcgctgcaccggatgtcg
atcatggcacacgaggtcgtcgtgatgccgtacaagacgttccggctgaacacgacggtg
tgcccgccgtacaacgcggacttcgacggcgacgagatgaacatgcacgccctccagaac
gaggaggcccgtgcggaggcccgcgtcctgatgcgcgtgcaggaacagatgctctcgccg
cggttcggtgagaacatcatcggggcgatccaggaccacatcagcgggacctacctgctg
accaaccagaacccgcagttcaacgagacccaggcgctggacctgctccgggcgacccgg
atcgacgaactgcccgaacccgacggtaccgacgaggccggcaacgagtactggaccggc
cggacggtgttctcggagctgctgcccgacgaactcaatctggagttcgtctcctcggcc
ggcgacgacgtcgtcatcgaggagggccagctcgtcgaggggacgatcgacgaggacgcg
gtcggcgcgttcggcggggagatcgtcgacaccatcgccaaggtgtactcgaagacccgc
gcacggatcttcgtcaacgaggtcgcctccctggcgatgcgctcgatcatgcacttcggg
ttctcgatcgggatcgacgacgaatcgatctcgccggcggccgaagagcagatcgacgag
gcgatcgagaacgcctacgcccgcgtccaggaactcatcgacacctacgatcggggcgaa
ctcgaatcgctgcccggccgcaccgtcgacgagaccctggagatgaagatcatgcagacg
ctggggaaggcccgtgacagtgcgggtgacatcgccgaagagcacttcgacgacgacaac
cccgccgtggtcatggccgagtccggtgcgcgtgggtcgatgctgaacctgacccagatg
gccggctgtgtcggccagcaggcggtccgtggcgagcggatcaaccgtggctacgaggac
cgcaccctcagccactacaagcccgacgacctctcggcggaggcccacggcttcgtggaa
cactcttaccggggcggcctgaacccgcgggagttcttcttccacgcgatgggtggccgc
gaggggctggtcgacacggccgttcgtacctcgaagtccggttacctccagcgtcggctc
atcaacgccctctccgagctagagacccagtacgacggcaccgtccgggacacctcggat
accatcgtccagttcgagttcggcgaggacggcacgagtccggtgaaggtgtcctcctcc
gaggacaacgacatcgacgtcgaccggatcgcagaccgcgtgctcgacaccgaattcgac
agcgacgaggccaaacaggagttcctcggcaaggagcgctcgccgacgaacctctcggaa
cacgccgacgactggtggatggcccagagtgacgactaa
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