Halorientalis sp. IM1011: BV210_07040
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Entry
BV210_07040 CDS
T04693
Name
(GenBank) helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hali
Halorientalis sp. IM1011
Pathway
hali03022
Basal transcription factors
hali03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hali00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BV210_07040
09124 Replication and repair
03420 Nucleotide excision repair
BV210_07040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hali03021
]
BV210_07040
03036 Chromosome and associated proteins [BR:
hali03036
]
BV210_07040
03400 DNA repair and recombination proteins [BR:
hali03400
]
BV210_07040
Enzymes [BR:
hali01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BV210_07040
Transcription machinery [BR:
hali03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BV210_07040
Chromosome and associated proteins [BR:
hali03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
BV210_07040
DNA repair and recombination proteins [BR:
hali03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BV210_07040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
ATPase
SLFN-g3_helicase
Zot
HBB
SecA_DEAD
nSTAND3
AAA_25
AAA_34
PhoH
Asparaginase_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AQL42480
LinkDB
All DBs
Position
1397964..1400165
Genome browser
AA seq
733 aa
AA seq
DB search
MSSDGDDAGYVRFFPYDEPYDHQRDAMDRIYDALGDGSDVLFEGATGTGKTLAALVPALE
YAREEDKTVVITTNVHQQMRQFVREARAITEQEPIRAVVFRGKGSMCHVDVGYEECQALR
DTTREIVEKEQDLAELNEREETLLEESQAGSEEAAEARGAVVEELEAVEEDLEDLRETGN
TCDYYYQNLTGNTDAFYEWLFADVRDPDDIYEYAEMEGFCGYELLKEGMEGVDLVVCNYH
HLLDPGIREHFFRWLGRDPEDVITVFDEAHNVEDAARDHATRTLTENTLDSALDELAEQD
DPRAEAARNVVQAFRSALVETYDDALGFGERERIEENWEDLTITNEGGRDDLTIAFLQAY
TGPGYDVDLREALKFARALDEKYEEAYKNGETSTRQECQTLQTIQFVRMWMDEGDAQGHY
PVVSVRRDDASGDVYGRAELYRCIPQEVTRSLFEELHASVLMSATLRPFPVTEDVLGLDD
PETMAYGAQFPEERRRTYAVEAPALFASERDDRAVQDTVTGVLEDAIRFTPGNTLAFFPS
YSEAERYHDRVQTAGDRYLDKPATSARELREEFTDSQNGVLFTSLWGTLAEGVSFDDGDA
RTVVVVGVPYPHLDDRMEAVQEAYDQAFGDGGGEWMGTEDAGWAYAVEIPTVRKTRQALG
RVVRSPEDFGARVLVDKRYTELGERELGNYTVRETFPPEERAEMIDIDPEKLKFAMLNFY
GDMDAWDGAPPKP
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgagcgacggagacgacgccggctacgttcgattcttcccgtacgacgagccctac
gaccaccagcgcgacgcgatggaccgcatctacgacgcgctcggcgacgggtcggacgtg
ctgttcgagggcgcgaccgggaccggcaagaccctggccgcactggtgccagcactggag
tacgcccgcgaggaagacaagacggtcgtcatcacgacgaacgtccaccagcagatgcgt
cagttcgtccgggaggcccgtgccatcaccgaacaggagccgatccgcgcggtcgtcttt
cgcgggaaagggtcgatgtgccacgtcgacgtgggctacgaggagtgtcaggccctgcgg
gacaccacccgcgagatcgtcgagaaagagcaggacctcgcggaactgaacgagcgcgaa
gagacgctgctggaggagagccaggccggcagcgaggaggccgccgaggcccgcggcgcg
gtcgtcgaggaactggaggccgtcgaggaggacctcgaggacctgcgggagaccggcaac
acctgtgactactactaccagaatctgacggggaacacggacgccttctacgagtggctg
ttcgcggacgtgcgcgaccccgacgacatctacgagtacgccgagatggaggggttctgc
ggctacgaactcctcaaagaggggatggaaggcgtcgacctcgtcgtctgtaactaccac
cacctgctcgatccggggatccgcgagcacttcttccggtggctcgggcgggaccccgag
gacgtgatcaccgtcttcgacgaggcccacaacgtggaggatgcggcccgggaccacgcg
acccgcaccctcacggagaacaccctcgacagcgcgctggacgaactcgccgaacaggac
gatccgcgagccgaggccgcacggaacgtcgtccaggccttccgctcggcgctggtcgag
acctacgacgacgccctcggattcggcgagcgcgagcgaatcgaggagaactgggaggat
ctcacgatcaccaacgaaggtggccgcgacgacctgaccatcgccttcctgcaggcctac
accgggccgggctacgacgtggacctccgggaggcgctgaagttcgcccgcgcgctggac
gagaagtacgaggaggcgtacaagaacggcgagaccagcacccgacaggagtgtcagacc
cttcagactatccagttcgtcaggatgtggatggacgagggcgacgcccagggccactac
ccggtggtgagcgtccgccgtgacgacgcgagcggcgacgtctacggccgggccgaactc
taccggtgtatcccacaggaggtcacccggtcgctgttcgaggaactccacgccagcgtg
ctgatgagcgcgacactgcgtcccttcccggtcaccgaggacgtactcggcctcgacgac
cccgagacgatggcctacggcgcgcagttccccgaggaacggcgacggacctacgccgtc
gaagcgccggcgctcttcgccagcgagcgcgacgatcgcgcggtccaggacaccgtgacc
ggcgtcctcgaagacgccatcaggttcacgccgggcaacacgctcgccttcttcccgagt
tacagcgaagccgagcgctatcacgaccgggtgcagaccgccggcgaccggtacctcgat
aaacccgcgacgagcgccagagaactccgcgaggagttcacggatagccagaacggcgtc
ctctttacgtcgctgtggggtaccctcgcggagggcgtgagcttcgacgacggcgacgct
cggaccgtcgtcgtcgtcggcgtcccctatccccatctggacgaccggatggaggcggtg
caggaggcttacgaccaggccttcggcgacggcggcggcgagtggatggggaccgaggac
gcgggctgggcctacgccgtcgagattcccacggtccgcaagacccggcaggcgctgggg
cgggtcgtccgctcgcccgaggacttcggggcgcgcgtgctggtcgacaaacgctacacg
gaactcggcgagcgggaactgggtaactataccgtgcgggagacgttcccgccggaggag
cgcgcggagatgatcgacatcgacccggagaaactgaagttcgcgatgctgaacttctac
ggcgacatggacgcctgggacggagcgccgccgaaaccgtag
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