Halorientalis sp. IM1011: BV210_08165
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Entry
BV210_08165 CDS
T04693
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
hali
Halorientalis sp. IM1011
Pathway
hali03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hali00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BV210_08165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hali03400
]
BV210_08165
DNA repair and recombination proteins [BR:
hali03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BV210_08165
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BV210_08165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_22
UB2H
DUF87
Cofilin_ADF
AAA_30
HD_3
Motif
Other DBs
NCBI-ProteinID:
AQL42685
UniProt:
A0A1Q1FIL3
LinkDB
All DBs
Position
complement(1612634..1614694)
Genome browser
AA seq
686 aa
AA seq
DB search
MSDTSGSPLSPDRPDVDRAFRVDAPFDPAGDQPEAIRKLADGYRQGMDEQTLLGVTGSGK
TNTVSWVIEEIQKPTLVIAHNKTLAAQLYEEFRELFPDNAVEYFVSYYDYYQPEAYVEQT
DTFIDKDASINDEIDRLRHSATRSLLTRDDVIVVASVSAIYGLGDPRNYVDMSLKLEQGQ
EIERDELLGRLVDLNYERNDVDFTQGTFRVRGDTLEIYPMYGRYAVRVEFWGDEIDRLLK
IDPLEGEVKSTDPAVLLHPAEHYSIPEDRLDRAIEEIEELLEQRVRYFERQGDAVAAQRI
EERTTFDLEMLRETGYCSGIENYSVHLSDRDSGEAPYTLLDYFPDDFLTVIDESHQTVPQ
IRGQYEGDKSRKESLVENGFRLPTAFDNRPLTFEEFEEKTNQTLFVSATPSDYEREVSEQ
VVEQIVRPTHLVDPAVEIADATGQVDDLMDRIDERIERDERTLVTTLTKRMAEDLTEYLE
EAGVDVAYMHDETDTLERHEIIRSLRLGEIDVLVGINLLREGLDIPEVSLVAILDADQEG
FLRSETTLVQTMGRAARNVNGEVVLYADEVSGAMESAIEETNRRREIQQEYNEEHGFEPT
TIDKPVGETNLPGAETDTGGVAGMDPDDEGEAEQLIAELEERMTEAADNLEFELAADIRD
RIRELRQEFEMETDEEGVVPEPADEF
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacctccggcagccccctctcgcccgaccgtccagacgtggaccgggcgttc
cgcgtcgacgcgccgttcgaccccgcgggcgaccagcccgaggccatccggaaactggcc
gacgggtaccggcagggcatggacgagcagaccctgctcggcgtcacggggtcggggaag
accaacaccgtctcctgggtgatcgaggagatccagaagccgaccctcgtcatcgcccac
aacaagaccctcgccgcgcaactgtacgaggagttccgggagctgttcccggacaacgcc
gtcgagtacttcgtctcctactacgactactaccagcccgaggcctacgtcgagcagacg
gacaccttcatcgacaaggacgcttcaatcaacgacgagatcgaccgcctgcgacactcc
gcgacccgctcgctgctcacgcgggacgacgtaatcgtcgtcgcgagcgtctcggccatc
tacggcctcggtgacccgcgtaactacgtcgacatgtccctgaaactcgaacagggccag
gagatcgaacgcgacgagttgctcggtcggctggtcgatctgaactacgagcgcaacgac
gtggacttcacgcagggtaccttccgggtgcgtggcgacaccctcgagatctatccgatg
tacggccgctacgccgtccgcgtcgagttctggggcgacgagatcgaccgcctcctgaag
atcgaccctctcgaaggcgaggtcaagagcaccgaccccgccgtcctgctccaccccgcg
gagcactactcgatccccgaggaccgactggaccgggctatcgaggagatcgaggagttg
ctcgaacagcgagtccgatacttcgagcgccagggcgacgccgtcgccgcccagcgcatc
gaggaacgcaccaccttcgatctggagatgctgcgggagaccggctactgttcgggcatc
gagaactactcggtccacctctcggaccgcgattcgggcgaagccccctacaccctgctg
gattacttcccggacgacttcctcaccgtcatcgacgagtcccaccagaccgtcccgcag
atccgcggccagtacgagggcgacaagagccggaaggagagcctcgtcgagaacggcttc
cggctccccaccgccttcgacaaccgcccgctcaccttcgaggagttcgaggagaagacc
aatcagacgctgttcgtcagcgccacgccgagcgactacgagcgcgaggtctcagagcag
gtggtcgaacagatcgttcgccccacacacctcgtcgaccccgcggtggagatcgccgac
gcgacgggacaggtcgacgacctcatggaccggatcgacgagcgcatcgagcgcgacgaa
cgcaccctcgtcaccaccctcaccaagcggatggccgaggacctcaccgagtacctcgag
gaggccggtgtcgacgtggcctacatgcacgacgagaccgacacgctcgagcgccacgag
atcatccgctcgctccgcttgggcgagatcgacgtgctcgtcggcatcaacctcctccgg
gaggggcttgacatccccgaggtgagcctcgtggccatcctcgacgccgaccaggagggc
ttcctccggagcgagacgacgctggtccagacgatgggccgggccgcccgcaacgtcaac
ggcgaggtcgtgctgtacgccgacgaggtgagcggggccatggagtcggccatcgaggag
accaaccgacgccgggagatccagcaggagtacaacgaggaacacggcttcgaaccgacg
accatcgacaagcccgtcggcgagacgaacctccccggtgccgagaccgacaccggcggc
gtcgccgggatggaccccgacgacgagggcgaggccgagcagttgatcgccgaactcgaa
gagcgcatgacggaggccgccgacaacctggagttcgagctcgcggcggacatccgcgac
cgtatccgcgaactccgccaggagttcgagatggagaccgacgaggaaggcgtcgtcccg
gaaccggccgacgagttctga
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