Halorientalis sp. IM1011: BV210_09600
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Entry
BV210_09600 CDS
T04693
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hali
Halorientalis sp. IM1011
Pathway
hali03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hali00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BV210_09600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hali03021
]
BV210_09600
Transcription machinery [BR:
hali03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
BV210_09600
Prokaryotic type
Archaeal type
TFB
BV210_09600
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
RB_B
HTH_3
Cas12f1-like_TNB
TFIIB_C_1
Motif
Other DBs
NCBI-ProteinID:
AQL42953
LinkDB
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Position
complement(1895057..1895917)
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AA seq
286 aa
AA seq
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MATSTQCCPECEGRLRESESETVCGECGLVVAEDAIDHGPEWRSFADDETEKERTGAPLT
RSRHDRGLTTEIGRSTRLKGRKRRRFARMRRQHNRARIKSKAERNRVYAFGEIRRLVSAL
DLTDHVRDQACVLFESAQSEDLLRGRSIEGFTAAVVYATCRTASVSRTLDEVVDAARASE
GELTAAYDALNRELGLSTGPIDPAEYLPRFASRLDLPQAVERRADALVDAARERGLVSGR
DPSGVAAGCLYLAARELECDLTQAEAAETADVTPVTLRSTYQDLRE
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggctacgtcaacgcagtgctgtccggaatgtgaggggagactccgcgagagcgagagc
gaaacggtctgtggggagtgcggcctcgtcgtcgccgaggacgccatcgaccacgggccc
gagtggcgcagtttcgcggacgacgagaccgagaaggaacggaccggcgcgccgctgacg
cggtcgcgccacgaccgcgggctcaccaccgagatcgggcgctcgacccggctcaagggg
cgcaagcgccgccggttcgctcggatgcgccgccagcacaaccgcgcccgcatcaagtcc
aaggccgagcgcaaccgggtgtacgccttcggcgagatccgccggctggtcagcgcactc
gacctgaccgatcacgtccgcgatcaggcgtgtgtcctcttcgagtccgcacagtccgag
gatctgctccggggccgctccatcgaggggttcaccgcggccgtcgtctacgcgacctgc
cggaccgcctcggtctcgcggacgctcgacgaagtcgtcgacgccgcccgcgcttccgag
ggcgagctcacggccgcctacgacgccctcaaccgcgagctggggctctcgaccggcccc
atcgaccccgcggagtacctgccccgcttcgccagccggctggatctcccgcaggccgtc
gagcgccgcgccgacgcgctcgtcgacgccgcccgggagcgcgggctggtctccggtcgg
gacccctcgggcgtcgccgccggctgtctctatctcgccgcgcgggaactggagtgtgat
ctcacacaggccgaggcggccgagaccgccgacgtgacgccggtgacgctccgatccacc
tatcaggacctgcgggagtga
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