Halorientalis sp. IM1011: BV210_15890
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Entry
BV210_15890 CDS
T04693
Name
(GenBank) transcription initiation factor IIB 3
KO
K03124
transcription initiation factor TFIIB
Organism
hali
Halorientalis sp. IM1011
Pathway
hali03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hali00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BV210_15890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hali03021
]
BV210_15890
Transcription machinery [BR:
hali03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
BV210_15890
Prokaryotic type
Archaeal type
TFB
BV210_15890
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Sigma70_r4
RPA_interact_C
Trm112p
Lar_restr_allev
Zn_ribbon_3
DUF7573
Zn_Ribbon_YjdM
Motif
Other DBs
NCBI-ProteinID:
AQL44094
LinkDB
All DBs
Position
3067617..3068585
Genome browser
AA seq
322 aa
AA seq
DB search
MVRPSRQREREQDRETEKETGDDEEMQSCPECESANLVSSADGGEIVCEDCGLVIEEENI
DRGPEWRAFNHSERQSKSRVGAPTTQTMHDKGLTTQIDWKDKDAYGQSLSSEKRSQMHRL
RKWQERIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALNEDLIRGRSIE
GVATSCLYAACRQEGIPRSLEEVSDVSRVDQKEIGRTYRYVAQELSLKMEPVDPKQYVPR
FASDLNLSEEVQSKANEIIDETAEKGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVADV
AQVTEVTIRNRYQEQIEAIGVR
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggttcgtccgagtcgccagcgggagcgcgagcaggaccgagagaccgagaaagagacc
ggggacgacgaggagatgcagagttgccccgaatgcgagtcagcaaacctggtatcgagc
gctgacgggggtgaaatcgtctgtgaagactgcgggctggtgatcgaagaggagaacatc
gaccggggccccgagtggcgtgcgttcaaccacagcgagcgccagagcaagtcccgcgtg
ggcgcgccgacgacacagacgatgcacgacaaggggctgaccacacagatcgactggaag
gacaaagacgcctacggtcagtccctgtcctcggagaagcgcagtcagatgcaccgcctc
cggaagtggcaggagcgcatccggacgaaagacgccggcgagcgcaacctccagttcgcg
ctctctgagatcgaccgcatggcctccgcgctcggggtgccccgctctgtgcgggaggtc
gcctcggtcatctatcgccgggcgctcaacgaggacctcatccgtggccgctccatcgag
ggcgtcgccacgtcctgcctgtacgccgcctgccgtcaggagggcatcccgcgctccctc
gaagaagtctcggacgtgtcccgggtcgaccagaaggagatcggacggacctaccgctac
gtcgcccaggaactcagcctgaagatggagccggtcgaccccaaacagtacgtcccgcgt
ttcgcctccgacctcaatctctcggaagaggtccagtccaaggccaacgaaatcatcgac
gagaccgccgagaagggcctgctctcgggcaagtccccgaccggctacgccgccgccgcc
atctacgccgcctccctgctctgtaacgagaagaagacccagcgcgaggtcgcagacgtc
gcccaggtcaccgaggtcaccatccgaaaccgctatcaggaacagatcgaagccatcggc
gtccgctga
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