KEGG   Haloarcula sp. JP-L23: G9465_03995
Entry
G9465_03995       CDS       T06489                                 
Name
(GenBank) replication factor C small subunit
  KO
K04801  replication factor C small subunit
Organism
halj  Haloarcula sp. JP-L23
Pathway
halj03030  DNA replication
Brite
KEGG Orthology (KO) [BR:halj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    G9465_03995
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:halj03032]
    G9465_03995
DNA replication proteins [BR:halj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     G9465_03995
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RuvB_N AAA_lid_RFC1 AAA_14 nSTAND_NTPase5 Rad17 AAA_22 AAA_16 AAA_assoc_2 ResIII AAA_3 Mg_chelatase AAA_7 RCF1-5-like_lid nSTAND3 TIP49 AAA_18 Sigma54_activat AAA_5 AAA_2 Sigma54_activ_2 DNAX_ATPase_lid AAA_30 AAA_24 AAA_28 NPHP3_N PhoH NB-ARC AAA_19 RNA_helicase AAA_25 Viral_helicase1 TsaE NACHT TrwB_AAD_bind DUF815 Gp44_lid DUF3253 SLFN-g3_helicase AAA_11 AAA_29
Other DBs
NCBI-ProteinID: QIO21556
LinkDB
Position
complement(809836..810813)
AA seq 325 aa
MSEAESESRAGREEVWIEKYRPESLDDVMGHEDIVGRLQSYVRRNDLSHMLFSGPAGTGK
TTCATAIARELYGEDWREHFLELNASDERGIDVVRDRIKNFARTSFGGVEYRIIFLDEAD
ALTSDAQSALRRTMEQFSNNVRFILSCNYSSQIIDPIQSRCAVFRFSPLSDDAVESEIRH
IAAEEDIELTDDGVDALVYAAAGDMRKAINGLQAASVSGDVVDESAVYAITSTARPEEIH
DMVQSALDGDFTAARATLDRLLTEEGIAGGDIIDQLHRSVWEFDVDDEAAVRILERVGET
DYRITQGANERVQLEAMLASLAKGQ
NT seq 978 nt   +upstreamnt  +downstreamnt
atgagtgaggccgagtccgagtcgcgggcgggacgcgaagaggtgtggatagagaagtac
cgcccggagtcgttagacgacgtgatgggccacgaggacatcgtcggccgcctgcagagc
tacgtccggcgcaacgacctctcgcacatgctgttctcggggccggcgggcaccggcaag
accacctgcgcgacggccatcgcccgcgaactgtacggcgaggactggcgcgagcacttc
ctcgaactgaacgcctccgacgagcggggtatcgacgtggtccgggaccgcatcaagaac
ttcgcgcggacgagtttcggcggcgtcgagtaccgcatcatcttcttagacgaggccgac
gcgctgacgagcgacgcccagtccgcactccgccggacgatggagcagttctcgaacaac
gtccgcttcatcctctcgtgtaactactccagccagatcatcgaccccatccagtcccgg
tgtgccgtcttccggttctcgccgttgtcggacgacgccgtcgagtccgagatacgccac
atcgccgccgaggaggacatcgaactcaccgacgacggcgtcgacgcgctcgtctacgcc
gccgccggcgacatgcgcaaggccatcaacggcctgcaggccgcctcggtcagcggcgac
gtggtcgacgagtcggcggtgtacgccatcacctcgacggcccgccccgaggagattcac
gacatggtccagtccgcactcgacggcgacttcacggccgcccgcgcgacgctggacaga
ctgctcaccgaggagggcatcgctggcggcgacatcatcgaccagttgcaccggtcggtc
tgggagttcgacgtcgacgacgaggcggcggtccgcatcctcgaacgcgtcggcgagacg
gactaccgcatcacgcagggcgccaacgaacgggtccagctagaggcgatgctggcgagt
ctcgcgaaagggcagtag

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