Haloarcula sp. JP-L23: G9465_05315
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Entry
G9465_05315 CDS
T06489
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
halj
Haloarcula sp. JP-L23
Pathway
halj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
halj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G9465_05315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halj03021
]
G9465_05315
Enzymes [BR:
halj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G9465_05315
Transcription machinery [BR:
halj03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
G9465_05315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
RNA_pol_Rpb1_5
HTH_3
Motif
Other DBs
NCBI-ProteinID:
QIO21801
LinkDB
All DBs
Position
1051623..1054532
Genome browser
AA seq
969 aa
AA seq
DB search
MSSQQTPQEIGQLSFGLMDPEEYREMSATKVITADTYDDDGFPIDMGLMDPRLGVIDPGL
ECKTCGKHSGSCNGHFGHIELAAPVIHVGFAKLIRRLLRGTCRECSRLCLDEGEREEFTE
QLQRSRDLGRDLNDVTKAAIRQARKKDRCPYCGEKQYDIKHEKPTTYYEVQQVLAADYPD
RIAEAMEESDERIAPTDLAEETGIDSGRVQEILSGEFRPRQDDRRALEKALSVDLTEEDM
NKLMPSDIRDWFEDIPDEDIEVLGMNPERSRPEWMILTVLPVPPVTARPSITLDNGQRSE
DDLTHKLVDIIRINQRFMENREAGAPQLIIEDLWELLQYHVTTFMDNEISGTPPARHRSG
RPLKTLSQRLKGKEGRFRGSLSGKRVNFSARTVISPDPTLSLNEVGVPERVAREMTQTMN
VNERNLDNARRYVANGPEGHPGANYVRRPDGRRLKVTEKNCEELAEKVEPGWEVSRHLVD
GDIIIFNRQPSLHRMSIMAHEVVVMPYKTFRLNTVVCPPYNADFDGDEMNMHALQNEEAR
AEARVLMRVQEQMLSPRFGENIIGAIQDHISGTYLLTHTNPQFNETQALDLLRATRIDEL
PEADGVDDTGEAYWTGRTLFSELLPDDLNLEFTSSAGDTVTIEDGEMTSGTIDEDAVGAF
GGEVVDTIAKDYSKTRARILVNEVSALAMRSIMHFGFSIGIDDESIPRPAEEQINDAIDN
AYDRVEELIETYERGDLESLPGRTVDETLEMKIMQTLGKARDSAGDIAEDHFDDDNPAVV
MAESGARGSMLNLTQMAGCVGQQAVRGERINRGYENRTLSHFEEGDLSADAHGFVEASYR
SGLSPKEFFFHAMGGREGLVDTAVRTSKSGYLQRRLINALSELETQYDGTVRDTSDTIVQ
FEFGEDGTSPVDVSSSQDEAAVDVEKIADSVLNEEFESEKQKESFLGQRTERTNLSEHAD
DWWMAEGDD
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgagttcccaacagacaccacaggaaatcggtcagctcagtttcgggctgatggacccc
gaggagtaccgagagatgtcggccacgaaggtcatcacggccgacacctacgacgacgac
ggcttccccatcgacatggggctgatggacccgcggctgggcgtcatcgaccccggactg
gagtgtaagacctgtgggaaacacagcgggtcgtgtaacggccacttcggccacatcgaa
ctcgccgccccggtcatccacgtcgggttcgcgaagctcatccgacggctcctgcgcggt
acctgccgtgagtgttcacggctctgtctcgacgagggcgaacgcgaggagttcaccgag
caactccagcgctcgcgtgacctcggtcgcgacctcaacgacgtgacgaaggccgccatc
cgacaggctcgcaagaaggaccgctgtccgtactgcggcgagaagcagtacgacatcaaa
cacgagaagccgacgacctactacgaggtccagcaggtcctggccgcggactaccccgac
cgcatcgccgaggcgatggaggagtccgacgaacgcatcgcaccgacggacctcgcagag
gagaccggcatcgacagcgggcgcgtacaagagattctaagcggcgagtttcgcccgcga
caggacgaccgccgcgcactggagaaggcgctctcggtcgacctgaccgaggaggacatg
aacaaactgatgccctcggacatccgggactggttcgaggacatcccggacgaggacatc
gaggtgctcggcatgaaccccgagcggtcccgccccgagtggatgattctgacggtgctg
ccggtgccgccggtcaccgctcgcccctccatcacgctcgacaacggccagcgctccgag
gacgacctcacccacaaactggtcgacatcatccgcatcaaccagcggttcatggagaac
cgcgaggccggtgcgccccaactcatcatcgaggacctctgggaactgctccagtaccac
gtcacgacgttcatggacaacgagatttcgggcacgccgccggcgcgacaccgctccggc
cgcccgctgaagaccctctctcagcgcctcaaaggcaaggaaggtcgcttccgtggttcg
ctgtccgggaagcgcgtcaacttctctgcgcgtaccgtcatctcgcctgacccgaccctc
tcgctgaacgaggtcggcgtccccgaacgcgtcgctcgcgagatgacccagacgatgaac
gtcaacgagcgcaacctcgacaacgctcgtcgctacgtcgccaacggccccgagggccac
cccggtgccaactacgtccgacgaccggacggccgccgactcaaagtgaccgagaagaac
tgcgaggaactggccgagaaggtcgaacccggctgggaagtgtcccgccacctcgtggac
ggcgacatcatcatcttcaaccggcagccgtcgctgcaccggatgtccatcatggcccac
gaagtggtcgtgatgccgtacaagacgttccggctgaacaccgtcgtctgcccgccgtac
aacgccgacttcgacggcgacgagatgaacatgcacgccctgcaaaacgaggaggcccgg
gccgaggctcgcgtcctcatgcgcgtgcaggaacagatgctctcgccgcgcttcggtgag
aacatcatcggcgcgattcaggaccacatcagcgggacctatctgctgactcacaccaac
ccgcagttcaacgagacgcaggcgctggacctcctgcgtgcgactcgtatcgacgaactg
cccgaggcagacggcgtcgacgacaccggcgaggcgtactggaccggccgcacgctgttc
tcggaactgctgccggacgacctcaatctcgagtttacgtcctcggccggcgacaccgtc
accatcgaggacggcgagatgacctccgggaccatcgacgaggacgccgtcggggccttc
ggcggcgaagtcgtcgacaccatcgcgaaggactactcgaagacgcgtgcccgcatcctc
gtcaacgaagtgtcggcgctggcgatgcgctctatcatgcacttcgggttctctatcggt
atcgacgacgagtcgattccgcggccggccgaagagcagatcaacgacgccatcgacaac
gcctacgaccgcgtcgaggaactcatcgagacctacgagcgcggtgatctcgaatccctg
ccgggccggaccgtcgacgagaccctagagatgaagattatgcagacgctcggcaaggcg
cgtgactctgccggtgacatcgccgaagaccacttcgacgacgacaacccggccgtcgtg
atggccgagtccggcgcgcgtgggtcgatgctgaacctgacccagatggccggctgtgtc
ggtcagcaggcagtccgcggcgagcgtatcaaccgtggctacgagaaccgtactctctcg
cacttcgaggagggtgacctctcggcggacgcccacggcttcgtggaagcttcctaccgc
tcgggcctctcgccgaaggagttcttcttccacgccatgggtggtcgcgaggggctggtc
gacacggcagtccggacctcgaagtccgggtacctccagcgccgtctcatcaacgcgctc
tccgaactggagacccagtacgacggcaccgtccgggacacctcggacactatcgtccag
ttcgagttcggcgaggacggcacgtcgccggtcgacgtctcctccagtcaggacgaggcc
gccgtcgacgtcgagaagatcgccgacagcgtcctcaacgaggagttcgagagcgagaaa
cagaaagagagcttcctcgggcagcgcaccgagcggacaaacctctcggaacacgccgac
gactggtggatggccgagggtgatgactaa
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