Haloarcula sp. JP-L23: G9465_06315
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Entry
G9465_06315 CDS
T06489
Name
(GenBank) transcription initiation factor IIB 2
KO
K03124
transcription initiation factor TFIIB
Organism
halj
Haloarcula sp. JP-L23
Pathway
halj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
G9465_06315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halj03021
]
G9465_06315
Transcription machinery [BR:
halj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
G9465_06315
Prokaryotic type
Archaeal type
TFB
G9465_06315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
DZR
Trm112p
Zn_ribbon_IS1595
DZR_2
Trp_repressor
Zn_ribbon_tTFIIB
Sigma70_r4
Auto_anti-p27
DUF1272
Motif
Other DBs
NCBI-ProteinID:
QIO21986
LinkDB
All DBs
Position
1238812..1239819
Genome browser
AA seq
335 aa
AA seq
DB search
MTTLSTHDAEERASTVDEETTAGEDHVCPDCGGHLTHDASRGETVCADCGLVVDENAIDR
GPEWRAFDSAERDKKSRVGAPTTKLMHDDGLSTNIGWQNKDANGNSLSSSQREKMQRLRT
WNERFRTRDHSERNLKQALGEIDRMGSALGVPKSARETAGVVYRRALDEGLLPGRSIEGV
ATASLYAAVRQTNLPQTIDDMVVVSRVDEQEFTRAYRYINRELSLEIGPPDPADYLSKFV
SELDASDELAMRAHDLIENGKAANVHSGKSPVGLAAAAIYAAGLLVNEELTQETISDATD
VSTVTIRDRYRELLEAEADRDPVEASAAGGSNASA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaccacactcagcacacacgacgccgaggaacgggccagcaccgtcgacgaggagaca
acggcgggtgaggaccacgtctgccccgactgcggcggccatctcacccacgacgcatct
cgcggcgagaccgtctgtgcggactgtgggctggtcgtcgacgagaacgccatcgaccgc
gggccggagtggcgcgcgttcgactccgccgagcgagacaagaagtcccgcgtcggcgcg
ccgacgacgaaactgatgcacgacgacgggctctcgaccaacatcggctggcagaacaag
gacgccaacgggaactcgctgtcgtccagtcagcgcgagaagatgcagcgtctgcggacg
tggaacgaacggttccgaacccgggaccacagcgagcgcaacctcaagcaggcgctgggc
gagatagaccggatggggagcgcacttggcgtccccaagagcgcccgcgagacggccggc
gtcgtctaccgtcgggcgctcgatgaaggcctgcttccgggccgctctatcgagggcgtt
gccacggcgtcgctgtacgccgccgtccggcagacgaacctcccgcagaccatcgacgac
atggtggtcgtcagccgtgtcgacgaacaggagttcacccgcgcctaccgctacatcaac
cgcgaactctcgctggagatcggcccgccggacccggccgactacctctcgaagttcgtc
tccgaactcgacgccagcgacgaactggcgatgcgggcccacgacctcatcgagaacggc
aaagccgcgaacgtccacagcggcaagagccccgtcggactcgcggccgcagccatctac
gcggcgggcctgctggtcaacgaggaactcacgcaggagaccatcagcgacgccaccgac
gtcagcacggtcactattcgggaccgctaccgcgaactcctcgaagccgaggccgaccgc
gatcccgtcgaggcgagcgctgcgggcgggtcgaacgcgagtgcatag
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