Haloarcula sp. JP-L23: G9465_07085
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Entry
G9465_07085 CDS
T06489
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
halj
Haloarcula sp. JP-L23
Brite
KEGG Orthology (KO) [BR:
halj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
halj03016
]
G9465_07085 (truD)
Enzymes [BR:
halj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
G9465_07085 (truD)
Transfer RNA biogenesis [BR:
halj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
G9465_07085 (truD)
Prokaryotic type
G9465_07085 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QIO22122
LinkDB
All DBs
Position
1390685..1392076
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AA seq
463 aa
AA seq
DB search
MREAHPIERVVGMEYYVSDADGVGGHLRASPEDFRVTELEAFDTSPVDADTGAYPHLVLR
VELHNWDTNDFASALSDRLGISRERVSWAGTKDKRAVTRQLFSVKGIDADDVPDVDGTDV
EVVGRAGRPVLFGDLAGNAFDIVVRDTENAANAASVLADLRAFAGGEGTEPRDGGPEDSD
ADSLPDGESTVGVPNYFGQQRFGSRRPVTHEVGLAIVREDWEGAVLAYVGNPHEREPEAT
QAARSYVDETRDWEGALDRLPRALGYERSMCHTLVENGAESPEDFREAVETLPTNLQTLF
VNAAQSYVFNRILSARLERGLPFDRPVEGDAVCFADSDAPEGLRLPDPDRTQRVTEQRLR
TVERHCERGRAFVTAPLVGTETELAAGEPGEIERDVLADVGLEPGDFDLPGEFDSEGTRR
AIMVRTDLGVDRDGDDLTFSFALPKGSYATVLLREFRKTDPDA
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaggcccaccccatcgagcgagtggtcggcatggagtactacgtcagcgacgcc
gacggcgtgggcggccacctgcgagcgagccccgaggacttccgtgtcaccgaactggag
gcgttcgatacgtcgcccgtcgacgccgataccggcgcttacccccatctggtcctccgc
gtcgagttacacaactgggacacgaacgacttcgcgagcgcgctctccgaccgactcgga
atctctcgcgagcgcgtctcgtgggccgggacgaaggacaagcgggcggtcacccggcag
ttgttctcggtgaagggcatcgacgccgacgacgtgcccgacgtggacgggacggatgtc
gaggtagttggccgcgccggccggccggtcctcttcggtgaccttgccggcaacgccttc
gacatcgtggtgcgtgacacggaaaacgcggcgaacgccgcgagcgtactggcggacctg
cgggcgttcgcgggcggtgaggggaccgaaccgcgagacggcggtcccgaggacagtgac
gccgactcgctccccgacggcgagtcgaccgtcggcgtcccgaactacttcggccagcag
cggttcgggtcgcgccgtccagtcacccacgaggtcggcctcgcaatcgtccgcgaggac
tgggagggggcggtgctcgcctacgtcggcaacccgcacgagcgcgaacccgaggccacg
caggccgcccggtcctacgtcgacgagacccgtgactgggaaggtgcgctggaccgcctg
ccgcgggcgctgggctacgagcggtcgatgtgtcacacgctcgtcgagaacggtgccgag
tcgcccgaggacttccgtgaagccgtcgaaacgctgccgacgaacctccagacgctgttc
gtcaacgccgcccagtcctacgtcttcaaccgcatcctctctgcgcgactcgaacggggg
ctgccgttcgaccgccccgtcgagggcgacgcagtgtgtttcgccgatagtgacgctccc
gagggattgcgactcccggaccccgaccgcacccagcgcgtgaccgagcaacgcctgcgg
accgtcgagcgacactgcgagcgcggccgggcgttcgtcacggcaccgctggtcggcacc
gagacggaactggccgcgggcgaacccggcgagatagagcgcgacgtgcttgccgacgtg
gggctcgaaccgggcgatttcgatctgccgggcgagttcgacagcgagggtacccgtcga
gcgattatggtccggacggacctcggcgtcgaccgcgacggcgacgacctgacgttctct
tttgcgctcccgaagggcagttacgcgacggtcctcttacgggagttccgcaagacggac
ccggacgcgtag
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