Haloarcula sp. JP-L23: G9465_07170
Help
Entry
G9465_07170 CDS
T06489
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
halj
Haloarcula sp. JP-L23
Brite
KEGG Orthology (KO) [BR:
halj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
halj03032
]
G9465_07170
03400 DNA repair and recombination proteins [BR:
halj03400
]
G9465_07170
Enzymes [BR:
halj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
G9465_07170
DNA replication proteins [BR:
halj03032
]
Prokaryotic type
DNA Topoisomerases
G9465_07170
DNA repair and recombination proteins [BR:
halj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G9465_07170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HHH_5
DNA_pol_lambd_f
Cdd1
HHH
IMS_HHH
IMS_HHH_1
DUF4332
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
QIO22137
LinkDB
All DBs
Position
complement(1405972..1408509)
Genome browser
AA seq
845 aa
AA seq
DB search
MELIITEKDNAARRIAEILSEGSATAERRNGVNVYRWGDTRVVGLSGHVVGVDFPPEYND
WRDVEPAELIDAEVTKEPTQENIVTTLKTLARRADEAVVATDYDREGELIGKEAYELIRE
ETDIPVSRVRFSSITEREVRNAFADAEEIDFDLAAAGEARQIIDLVWGAALTRFLSLSAR
QLGDDFISVGRVQSPTLKLIVDREREIEAFDPEDYWEIFADLQKNGSGFEAQYFYDDDGS
EAERVWNEADADAAYADLTSVDTATVTSVRRRTRTDSPPTPFNTTAFISAASSLGYSAQR
AMSIAEELYTAGYMTYPRTDNTVYPDDLEEDALLDEFVGSPTFGEDAESLLEQDDIVATE
GDEETTDHPPIHPTGEIPSKADISEDEWEIYELVVRRFFATVAEAATWERLRVVSEAGGR
SLKANGKRLVEPGYHAVYPYSSASENHVPDVEEGEELSISEVRLDAKQTQPPRRYGQSRL
IETMEDLGLGTKATRHNTLEKLYDRGYIEGDPPRPTALANAVVEAAEEFADRVVSDDMTA
QLERDMTRIANGEATLEEVADESREMLQEVFDELAASREEIGEHLQESLKADKTLGPCPE
CGESMLVRRSRQGSYFVGCDGFPECRNTLPLPSTGEPLVLDETCEEHDMHHVKMLAGRDT
FVHGCPRCEAEKADESDDEVIGPCPECGVAPAEQRDEGGEAAEGGDAEEGGELAIKHLRS
GSRLVGCTRYPDCDYSLPLPRNGDIEVTEAFCEEHDLPELVVDPDSDDPWELGCPICNFE
EYQARNAVEDLEDLNGIGAATADKLAAAGIESLDDLRAADPDGIAAEVQGVSAGQVQDWQ
SELEA
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggagctaatcatcacggagaaggacaacgccgcccggcgcatcgccgagattctctcg
gaagggagcgcgacggccgagcgacgaaacggcgtcaacgtctaccggtggggggacacg
cgcgtcgtcggcctctcggggcacgtcgtcggcgtcgacttcccgccggagtacaacgac
tggcgcgacgtcgaacccgccgaactcatcgacgccgaggtgaccaaggaaccgacccaa
gagaacatcgtcacgacgctcaagacgctcgctcgccgggccgacgaggccgtggtcgcg
acggactacgaccgcgagggcgaactcatcgggaaggaggcctacgaactcatccgcgag
gagacggacatccccgtctcccgcgtgcgcttctcttcgatcaccgagcgcgaggtccgc
aacgccttcgccgacgccgaggagatagacttcgacctcgcggccgccggcgaggcccgc
cagattatcgacctcgtgtggggggcggcgctgacccgcttcctctcgctgtcggcccgg
cagttgggtgatgacttcatctcggtgggccgagtccagtccccgacgctgaaactcatc
gtcgaccgcgagcgcgaaatcgaggcgttcgaccccgaggactactgggagatattcgcc
gacctccagaagaacggctccgggttcgaggcccagtacttctacgacgacgacggcagc
gaggccgaacgcgtctggaacgaggccgacgccgacgccgcctacgccgacctgacgagc
gtcgacacggccaccgtgacgagcgtccgccggcgtacccgcaccgacagtccgccgacg
ccgttcaacaccaccgccttcatctctgcggccagttcgctcggttactccgcccagcgc
gcgatgtccatcgccgaggaactgtacaccgccggctacatgacctatccccggacggac
aacaccgtctatccggacgatctggaggaagacgctctgctggacgagttcgtcggctct
cccaccttcggcgaggacgccgagtccctgctcgaacaggacgacatcgtcgccaccgag
ggcgacgaggagacgaccgaccacccgcccatccacccgaccggagagataccctcgaag
gcagatatctccgaagacgagtgggagatatacgaactcgtcgtccggcgcttcttcgcc
accgtcgcggaggcggcgacgtgggagcgcctgcgcgtcgtcagcgaggccggcggtcgc
tcgctgaaggccaacggcaagcggctggtcgaaccgggctaccacgccgtctacccctac
tccagcgccagcgaaaaccacgtccccgacgtcgaagaaggcgaggaactctccatctcg
gaggtccgactggacgccaaacagacccagccaccgcggcgctacggccagtctcgcctc
atcgagacgatggaggacctcggactggggacgaaggcgacccggcacaacacgctcgag
aaactgtacgaccggggctacatcgagggcgaccccccgcggccgacggcgctcgcgaac
gccgtcgtggaggccgccgaggagttcgccgaccgcgtcgtcagcgacgacatgaccgcc
cagttagagcgggacatgacccgcatcgccaacggcgaggcgaccctcgaagaggtggcc
gacgagtcccgcgagatgctccaggaagtgttcgacgaactggcggcctctcgtgaggaa
atcggcgagcacttacaggagtcactgaaagcggacaagacgctgggcccgtgtcccgag
tgcggcgagagcatgctcgtccggcggtcccggcaggggtcgtacttcgtcggctgtgac
ggcttcccggagtgtcggaacacgctgccgctcccgtcgacgggcgagccgctcgtgcta
gacgagacgtgcgaggaacacgacatgcaccacgtgaagatgctcgccggccgcgacacc
ttcgtccacggctgtccccgctgtgaggccgagaaggccgacgagagcgacgacgaagtc
atcggtccctgtcccgagtgtggcgttgctccggcggagcaacgagacgaaggcggtgaa
gccgccgaaggaggcgacgcggaggaaggcggcgaactcgccatcaaacacctccgctcg
gggtcccggctggtcgggtgtacgcgctaccccgactgcgactactcgttgccgctcccc
cgcaacggcgacatcgaggtcaccgaggcgttctgcgaggagcacgacctcccggaactc
gtcgtcgaccccgacagcgacgacccgtgggaactgggctgtcccatctgtaacttcgag
gagtatcaggcccgcaacgccgtcgaggacttagaagacctgaacggtatcggggccgcg
acggcggataaactcgccgccgctggcatcgaatcgctggacgacctgcgggcggccgac
cccgacggcatcgctgccgaggtgcagggcgtgagcgcggggcaggtacaagactggcag
tccgaactcgaagcctga
DBGET
integrated database retrieval system
