Haloarcula sp. JP-L23: G9465_07240
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Entry
G9465_07240 CDS
T06489
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
halj
Haloarcula sp. JP-L23
Brite
KEGG Orthology (KO) [BR:
halj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
halj03036
]
G9465_07240 (smc)
Chromosome and associated proteins [BR:
halj03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
G9465_07240 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
ATG16
Crescentin
AAA_15
AAA_13
AAA_21
AAA_29
ABC_tran_CTD
DUF724
Fib_alpha
APG6_N
DUF745
TolA_bind_tri
BRE1
TMF_DNA_bd
Lebercilin
MCPsignal
MscS_porin
FapA
DUF4407
FPP
BLOC1_2
GAS
Filament
EzrA
DUF1664
TPR_MLP1_2
Laminin_II
Motif
Other DBs
NCBI-ProteinID:
QIO22150
LinkDB
All DBs
Position
1424790..1428383
Genome browser
AA seq
1197 aa
AA seq
DB search
MHIKELVLDNFKSFGRKTRIPFYEDFTTISGPNGSGKSNIIDAVLFALGLARTSGIRAEK
LTDLIYNPGHADEDVDVSGDRQASVEVILANEDRTLERAQVVNAAGTEDVGDVDEIAIKR
RVKETEDNYYSYYYINGRSVNLSDIQDLLAQAGVTPEGYNVVMQGDVTEIINMTPGSRRE
IIDEIAGVAQFDQKKADAFEELDVVEERIDEAELRIEEKQTRLDQLEDERETALEYQSLR
EEKEEYEGYRKAAELEDKREELDAVEDRIAELEAELAELQAELDSRQGKVVRLEDELHEL
NQEIERKGEDEQLAIKRDIEEIKGDISRLEDKIATAEEAVEDAENERRQAFVQIDRKQET
IDDLESDVRETKVEKSNAKAEIAEKEASLADVQQRIDDIGEEFEEIKDELEAKRDTLEQL
KSERNDLQREQDRLLDEARRRSNEEDEKRAAIEEAEAEIPDLEADIEDLETELEKAEKNK
ATIGEVVDDLRAEKRELQSDLDDLEDEISAKQQEYAQLEAKAGEDGDSSYGRAVTAILNA
DRSGVHGTVGQLGGVDPEYATACETAAGGRLAHVVVDDDGVGQSCIEYLKARNAGRATFL
PITQMQNRSLPSLPNVDGVVDFAYNLVDFDPEYAGIFSYVLGDTVVVDSMDTARDLMGEY
RMVTLDGDLVEKSGAMTGGSSSGTRYSFSGGAGKLERVAKRINELEDERADVRDDLRDVE
DRLDDARDRESDATEQVRDIETSIERKETQLEETRERIETLESALEDIAADREAVADEMD
ELEADIEAKNEAITDIEADIEELEAEVQDSDLPDLTDEREAIEGEIDALEDRLDDLDAQL
NELQLEKQYAEDAIEDLHDDIETAQNRKAEKEERIAELEEQVEAKRELKAEKEQEVADLE
DELADLKGEREDLREDLQNAKEARDEQQSKVTDVERDLDDETEERERLEWEIDELEAQVD
DYDPEDVPDHDTVEAEIERLTGEMEALEPVNMRAIEEYDRVADDLADLEDQKETLVEEAE
GIRDRIDTYEARKKETFMESFDEINDQFQDIFERLSSGTGHLHLENEDDPFEGGLTMKAQ
PGDKPIQRLAAMSGGEKSLTALAFIFAIQRHNPAPFYALDEVDAFLDAANADLVGEMVDE
LAGDAQFVVVSHRSALLERSERAIGVMMQGDNVSAVTGIDLSGEGPDDEEEAVVSDD
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgcatatcaaagagctcgtcctcgacaacttcaagagcttcgggcggaagactcgcatc
ccgttctacgaagatttcactaccatcagcggcccgaacggctccgggaagtcgaacatc
atcgacgccgtcctctttgcgctcggactcgcccgcacctcgggcatccgcgccgagaaa
ctcaccgacctcatctacaaccccggccacgcggacgaggacgtcgacgtctctggcgac
cggcaggccagcgtcgaggtcatcctcgccaacgaggaccggaccctcgaacgcgcacag
gtcgtcaacgccgccggcaccgaagacgtcggcgacgtcgacgagatagccatcaagcgc
cgggtgaaagagaccgaggacaactactactcgtactactacatcaacggccgctcggtc
aacctctcggacatccaggacttgctcgcacaagcaggcgtcacgcccgaagggtacaac
gtcgtgatgcagggcgacgtcaccgagataatcaacatgacccccgggtctcgtcgagag
attatcgacgagatagccggcgtcgcccagttcgaccagaagaaggccgacgccttcgag
gaactggacgtcgtcgaagaacgcatcgacgaggcggaactgcgcatcgaggagaaacag
acccgtctcgaccagctcgaagacgaacgcgagacggcactggagtaccagtcgctccgc
gaggagaaagaggagtacgaggggtaccgcaaggccgccgaactcgaagacaagcgcgag
gaactcgacgccgtcgaggaccgcatcgccgagttggaggccgaactcgcggagcttcag
gcagaactggactcgcgacaggggaaggtcgtccgcctcgaagacgaactccacgaactc
aatcaggagatagagcgcaaaggcgaggacgaacaactcgccatcaagcgcgacatcgag
gagatcaagggcgacatctcgcggctagaagacaagatagcgaccgcagaggaggccgtc
gaggacgccgagaacgagcgcagacaggcgttcgtccagatagaccgcaagcaggaaacc
atcgacgacctcgagtcggacgtccgcgagacgaaagtcgagaagtcgaacgccaaggcc
gaaatcgccgagaaggaggcctcgctcgccgacgtccagcagcgtatcgacgacatcggc
gaagagttcgaggagataaaggacgaactcgaagcgaaacgcgacacgctagagcaactg
aagagcgaacggaacgacctccagcgagagcaggaccgcctgctggacgaggcccgccgc
cgctccaacgaggaagacgagaagcgggccgccatcgaggaggccgaggcggagattccc
gacctcgaagccgacatcgaggacttagagacggaactggagaaagccgagaagaacaag
gccaccatcggtgaggtggtcgacgacctgcgtgccgagaagcgggaactccagtcggac
ttagacgacctcgaagacgagatcagcgccaaacagcaggagtacgcccaactcgaagcg
aaggccggcgaggacggtgactcctcgtacggccgagcggtgacggccatcctgaacgcc
gatcgaagcggcgtccacggcaccgtcggacagttgggtggcgtcgaccccgagtacgcg
acggcctgtgagacggccgccggggggcgactcgcccacgtcgtcgtcgacgacgacggc
gtcggtcagtcctgcatcgagtacctcaaggcacgcaacgccgggcgagcgacgttcctg
ccaatcacacagatgcagaaccgctcgctcccgtcgcttccgaacgtggacggcgtggtc
gacttcgcgtacaacctcgtggacttcgaccccgagtacgcgggcattttctcgtacgtg
ctgggcgacaccgtggtcgtcgacagcatggacaccgcccgcgacctgatgggcgagtac
cgcatggtgacgctggacggcgacctcgtcgagaaatcgggcgccatgaccggcgggtcc
tcctcggggacccggtattcgttctccggcggcgccgggaaactcgaacgcgtcgccaag
cgcatcaacgaactggaggacgaacgcgcggacgtgcgcgacgacctgcgggacgtcgag
gaccgactcgacgacgcccgcgaccgtgaatccgacgcgaccgagcaggtccgggacatc
gagacgagcatcgagcgcaaggagacccaactcgaagagacccgcgagcgaatcgagacg
ctcgaatctgccctcgaagacatcgctgccgaccgcgaggcggtcgccgacgagatggac
gaactggaggccgacatcgaggccaagaacgaggcgatcaccgatatcgaggccgacatc
gaggagctagaggccgaggtacaggactctgacctgcccgacctcaccgacgagcgcgag
gccatcgagggcgagatagacgcgctggaggaccgactcgacgacttggacgcccaactc
aacgaactgcaactcgaaaagcagtacgccgaggacgccatcgaggacctccacgacgac
atcgagaccgcccagaaccgcaaggcagagaaggaagagcgcatcgccgaactggaagaa
caggtcgaggcgaagcgggaactgaaagccgagaaagagcaggaagtcgccgatctggag
gacgaactcgccgacctgaaaggcgagcgagaggacctgcgcgaggacctccagaacgcg
aaggaggcccgcgacgaacagcagtcgaaggtcaccgacgtcgaacgtgacctcgacgac
gagacggaggaacgagaacggctagagtgggagatagacgaactcgaagcgcaggtcgac
gactacgaccccgaggacgtccccgaccacgacaccgtcgaggccgaaatcgaacggctc
accggcgagatggaggcgctggaaccggtcaacatgcgcgctatcgaggagtacgaccgc
gtggccgacgatctcgcggacttggaggaccagaaggagacgttagtcgaggaggccgag
ggcatccgcgaccgcatcgacacctacgaggcccgcaagaaggagacgttcatggagtcg
ttcgacgagatcaacgaccagtttcaggacatcttcgagcgcctctccagcgggaccggt
cacctccatctggagaacgaagacgacccattcgagggcggcctgacgatgaaggcccaa
cccggcgacaagcctatccagcggctggcggcgatgtccgggggcgagaagtccctgacg
gcgctggcgttcatcttcgccatccagcggcacaaccccgcgccgttctacgcgctggac
gaggtcgacgccttcctcgacgccgcgaacgccgacctcgtcggcgagatggtcgacgaa
ctcgccggtgacgcccagttcgtcgtcgtctcgcaccgctcggccctgctcgaacgctcg
gaacgcgccatcggcgtgatgatgcagggcgacaacgtgagcgccgtgaccggtatcgac
ctctcgggtgaggggccggacgacgaagaggaggcggtggtgagcgatgactag
DBGET
integrated database retrieval system
