Haloarcula sp. JP-L23: G9465_07240
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Entry
G9465_07240 CDS
T06489
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
halj
Haloarcula sp. JP-L23
Brite
KEGG Orthology (KO) [BR:
halj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
halj03036
]
G9465_07240 (smc)
Chromosome and associated proteins [BR:
halj03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
G9465_07240 (smc)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
Rod_CreS
CCDC39
FKBP15
CCDC18_2nd
ATG16
AAA_21
AAA_13
ABC_tran_CTD
AAA_29
DUF724
Fib_alpha
HH_AprE
AAA_15
APG6_N
SPC25_N
Exonuc_VII_L
DUF745
TolA_bind_tri
CCDC89
CEP135_TSGA10_CC
LEKR1
Lebercilin
DUF8221
TMF_DNA_bd
CCDC172
MCPsignal
NOCA1_mid
MscS_porin
FapA
DUF4407
DUF8567
FPP
BLOC1_2
GAS
Filament
KIF21A_4th
CC_Bre1
CEP89
CLIP1
TPR_MLP1_2
DUF1664
CEP128
EzrA
HAUS1
Motif
Other DBs
NCBI-ProteinID:
QIO22150
LinkDB
All DBs
Position
1424790..1428383
Genome browser
AA seq
1197 aa
AA seq
DB search
MHIKELVLDNFKSFGRKTRIPFYEDFTTISGPNGSGKSNIIDAVLFALGLARTSGIRAEK
LTDLIYNPGHADEDVDVSGDRQASVEVILANEDRTLERAQVVNAAGTEDVGDVDEIAIKR
RVKETEDNYYSYYYINGRSVNLSDIQDLLAQAGVTPEGYNVVMQGDVTEIINMTPGSRRE
IIDEIAGVAQFDQKKADAFEELDVVEERIDEAELRIEEKQTRLDQLEDERETALEYQSLR
EEKEEYEGYRKAAELEDKREELDAVEDRIAELEAELAELQAELDSRQGKVVRLEDELHEL
NQEIERKGEDEQLAIKRDIEEIKGDISRLEDKIATAEEAVEDAENERRQAFVQIDRKQET
IDDLESDVRETKVEKSNAKAEIAEKEASLADVQQRIDDIGEEFEEIKDELEAKRDTLEQL
KSERNDLQREQDRLLDEARRRSNEEDEKRAAIEEAEAEIPDLEADIEDLETELEKAEKNK
ATIGEVVDDLRAEKRELQSDLDDLEDEISAKQQEYAQLEAKAGEDGDSSYGRAVTAILNA
DRSGVHGTVGQLGGVDPEYATACETAAGGRLAHVVVDDDGVGQSCIEYLKARNAGRATFL
PITQMQNRSLPSLPNVDGVVDFAYNLVDFDPEYAGIFSYVLGDTVVVDSMDTARDLMGEY
RMVTLDGDLVEKSGAMTGGSSSGTRYSFSGGAGKLERVAKRINELEDERADVRDDLRDVE
DRLDDARDRESDATEQVRDIETSIERKETQLEETRERIETLESALEDIAADREAVADEMD
ELEADIEAKNEAITDIEADIEELEAEVQDSDLPDLTDEREAIEGEIDALEDRLDDLDAQL
NELQLEKQYAEDAIEDLHDDIETAQNRKAEKEERIAELEEQVEAKRELKAEKEQEVADLE
DELADLKGEREDLREDLQNAKEARDEQQSKVTDVERDLDDETEERERLEWEIDELEAQVD
DYDPEDVPDHDTVEAEIERLTGEMEALEPVNMRAIEEYDRVADDLADLEDQKETLVEEAE
GIRDRIDTYEARKKETFMESFDEINDQFQDIFERLSSGTGHLHLENEDDPFEGGLTMKAQ
PGDKPIQRLAAMSGGEKSLTALAFIFAIQRHNPAPFYALDEVDAFLDAANADLVGEMVDE
LAGDAQFVVVSHRSALLERSERAIGVMMQGDNVSAVTGIDLSGEGPDDEEEAVVSDD
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgcatatcaaagagctcgtcctcgacaacttcaagagcttcgggcggaagactcgcatc
ccgttctacgaagatttcactaccatcagcggcccgaacggctccgggaagtcgaacatc
atcgacgccgtcctctttgcgctcggactcgcccgcacctcgggcatccgcgccgagaaa
ctcaccgacctcatctacaaccccggccacgcggacgaggacgtcgacgtctctggcgac
cggcaggccagcgtcgaggtcatcctcgccaacgaggaccggaccctcgaacgcgcacag
gtcgtcaacgccgccggcaccgaagacgtcggcgacgtcgacgagatagccatcaagcgc
cgggtgaaagagaccgaggacaactactactcgtactactacatcaacggccgctcggtc
aacctctcggacatccaggacttgctcgcacaagcaggcgtcacgcccgaagggtacaac
gtcgtgatgcagggcgacgtcaccgagataatcaacatgacccccgggtctcgtcgagag
attatcgacgagatagccggcgtcgcccagttcgaccagaagaaggccgacgccttcgag
gaactggacgtcgtcgaagaacgcatcgacgaggcggaactgcgcatcgaggagaaacag
acccgtctcgaccagctcgaagacgaacgcgagacggcactggagtaccagtcgctccgc
gaggagaaagaggagtacgaggggtaccgcaaggccgccgaactcgaagacaagcgcgag
gaactcgacgccgtcgaggaccgcatcgccgagttggaggccgaactcgcggagcttcag
gcagaactggactcgcgacaggggaaggtcgtccgcctcgaagacgaactccacgaactc
aatcaggagatagagcgcaaaggcgaggacgaacaactcgccatcaagcgcgacatcgag
gagatcaagggcgacatctcgcggctagaagacaagatagcgaccgcagaggaggccgtc
gaggacgccgagaacgagcgcagacaggcgttcgtccagatagaccgcaagcaggaaacc
atcgacgacctcgagtcggacgtccgcgagacgaaagtcgagaagtcgaacgccaaggcc
gaaatcgccgagaaggaggcctcgctcgccgacgtccagcagcgtatcgacgacatcggc
gaagagttcgaggagataaaggacgaactcgaagcgaaacgcgacacgctagagcaactg
aagagcgaacggaacgacctccagcgagagcaggaccgcctgctggacgaggcccgccgc
cgctccaacgaggaagacgagaagcgggccgccatcgaggaggccgaggcggagattccc
gacctcgaagccgacatcgaggacttagagacggaactggagaaagccgagaagaacaag
gccaccatcggtgaggtggtcgacgacctgcgtgccgagaagcgggaactccagtcggac
ttagacgacctcgaagacgagatcagcgccaaacagcaggagtacgcccaactcgaagcg
aaggccggcgaggacggtgactcctcgtacggccgagcggtgacggccatcctgaacgcc
gatcgaagcggcgtccacggcaccgtcggacagttgggtggcgtcgaccccgagtacgcg
acggcctgtgagacggccgccggggggcgactcgcccacgtcgtcgtcgacgacgacggc
gtcggtcagtcctgcatcgagtacctcaaggcacgcaacgccgggcgagcgacgttcctg
ccaatcacacagatgcagaaccgctcgctcccgtcgcttccgaacgtggacggcgtggtc
gacttcgcgtacaacctcgtggacttcgaccccgagtacgcgggcattttctcgtacgtg
ctgggcgacaccgtggtcgtcgacagcatggacaccgcccgcgacctgatgggcgagtac
cgcatggtgacgctggacggcgacctcgtcgagaaatcgggcgccatgaccggcgggtcc
tcctcggggacccggtattcgttctccggcggcgccgggaaactcgaacgcgtcgccaag
cgcatcaacgaactggaggacgaacgcgcggacgtgcgcgacgacctgcgggacgtcgag
gaccgactcgacgacgcccgcgaccgtgaatccgacgcgaccgagcaggtccgggacatc
gagacgagcatcgagcgcaaggagacccaactcgaagagacccgcgagcgaatcgagacg
ctcgaatctgccctcgaagacatcgctgccgaccgcgaggcggtcgccgacgagatggac
gaactggaggccgacatcgaggccaagaacgaggcgatcaccgatatcgaggccgacatc
gaggagctagaggccgaggtacaggactctgacctgcccgacctcaccgacgagcgcgag
gccatcgagggcgagatagacgcgctggaggaccgactcgacgacttggacgcccaactc
aacgaactgcaactcgaaaagcagtacgccgaggacgccatcgaggacctccacgacgac
atcgagaccgcccagaaccgcaaggcagagaaggaagagcgcatcgccgaactggaagaa
caggtcgaggcgaagcgggaactgaaagccgagaaagagcaggaagtcgccgatctggag
gacgaactcgccgacctgaaaggcgagcgagaggacctgcgcgaggacctccagaacgcg
aaggaggcccgcgacgaacagcagtcgaaggtcaccgacgtcgaacgtgacctcgacgac
gagacggaggaacgagaacggctagagtgggagatagacgaactcgaagcgcaggtcgac
gactacgaccccgaggacgtccccgaccacgacaccgtcgaggccgaaatcgaacggctc
accggcgagatggaggcgctggaaccggtcaacatgcgcgctatcgaggagtacgaccgc
gtggccgacgatctcgcggacttggaggaccagaaggagacgttagtcgaggaggccgag
ggcatccgcgaccgcatcgacacctacgaggcccgcaagaaggagacgttcatggagtcg
ttcgacgagatcaacgaccagtttcaggacatcttcgagcgcctctccagcgggaccggt
cacctccatctggagaacgaagacgacccattcgagggcggcctgacgatgaaggcccaa
cccggcgacaagcctatccagcggctggcggcgatgtccgggggcgagaagtccctgacg
gcgctggcgttcatcttcgccatccagcggcacaaccccgcgccgttctacgcgctggac
gaggtcgacgccttcctcgacgccgcgaacgccgacctcgtcggcgagatggtcgacgaa
ctcgccggtgacgcccagttcgtcgtcgtctcgcaccgctcggccctgctcgaacgctcg
gaacgcgccatcggcgtgatgatgcagggcgacaacgtgagcgccgtgaccggtatcgac
ctctcgggtgaggggccggacgacgaagaggaggcggtggtgagcgatgactag
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integrated database retrieval system
