Haloarcula sp. JP-L23: G9465_07575
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Entry
G9465_07575 CDS
T06489
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
halj
Haloarcula sp. JP-L23
Pathway
halj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
G9465_07575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halj03021
]
G9465_07575
Transcription machinery [BR:
halj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
G9465_07575
Prokaryotic type
Archaeal type
TFB
G9465_07575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Zn_ribbon_tTFIIB
Sigma70_r4
Zn_ribbon_LysW
HTH_Tnp_ISL3
Auto_anti-p27
Anti-TRAP
Cas12f1-like_TNB
A2L_zn_ribbon
Cyclin_C
DZR_2
Motif
Other DBs
NCBI-ProteinID:
QIO22210
LinkDB
All DBs
Position
complement(1488380..1489342)
Genome browser
AA seq
320 aa
AA seq
DB search
MSEHTRTRQRTDEQTEESSSTSTACPECSGSLVMDDEHGETVCEDCGLVVESDEIDRGPE
WRAFDSSEKDEKSRVGAPTTNMMHDKGLSTNIDWRDKDAYGNSLSGKQRQKMQRLRKWNE
RFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALDEDLLPGRSIEGVSTA
SVYAAARQAGVPRSLDEITDVSRVEKSEIARTYRYVVRELGLEVKPADPESYVPRFASSL
ELSDEAEHRARQLLQNAKEQGVHSGKSPVGLAAAAVYAAALLTNEKTTQAAVSEVADISE
VTIRNRYHELLEAEQDLPVA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacacacgcgaacacgacaacgaacggacgagcagacagaggaatcgagttcg
acatcgaccgcctgcccggagtgtagcggctctctcgtgatggacgacgaacacggcgaa
acggtctgtgaggactgtgggctcgtcgtcgaatccgacgagatagaccgcgggccggag
tggcgcgcgttcgactccagcgagaaagacgagaagtcccgcgtcggcgcgccgacgacg
aacatgatgcacgacaagggcctgtcgaccaacatcgactggcgcgataaggacgcctac
ggcaactccctgtcgggcaagcagcgccagaagatgcagcgcctccgcaagtggaacgag
cgattccgtacccgtgactccaaagagcgcaatctcaagcaggcgctgggcgaaatcgac
cggatggcctccgcgctcggtctgcccgagaacgtccgcgagacggcttctgtcatctac
cgccgcgcactcgacgaggacctgctccccggccgctccatcgagggcgtctcgacggcc
tccgtctacgccgccgcacggcaggccggcgtcccgcggtcgctcgacgaaatcacggac
gtctcccgcgtcgagaagagcgaaatcgcccgcacctaccgctacgtcgtccgcgaactc
ggcctcgaagtgaaacccgccgaccccgagagctacgtcccccgctttgcctcctcgctg
gagctctccgacgaagccgaacaccgcgcccggcaactcctccagaacgcgaaagagcag
ggcgtccactccgggaagtctccggtaggcctcgccgccgctgccgtctacgctgccgca
ctgctgaccaacgagaagacgacgcaggccgccgtcagcgaagtcgccgacatctccgag
gtcaccatccgcaaccgctatcacgaactcctcgaagccgagcaggacctccccgtcgcc
tga
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