Haloarcula sp. JP-L23: G9465_09605
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Entry
G9465_09605 CDS
T06489
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
halj
Haloarcula sp. JP-L23
Pathway
halj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
G9465_09605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halj03021
]
G9465_09605
Transcription machinery [BR:
halj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
G9465_09605
Prokaryotic type
Archaeal type
TFB
G9465_09605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
FtrD-like
Rcat_RNF216
Cyclin_C
Sigma70_r4
Cas12f1-like_TNB
Zn_Ribbon_YjdM
Motif
Other DBs
NCBI-ProteinID:
QIO22589
LinkDB
All DBs
Position
1865307..1866266
Genome browser
AA seq
319 aa
AA seq
DB search
MERPTRQRDTDQEEREQESEDTGQQTCPECESENISSDGGGELVCEDCGLVIEDENIDRG
PEWRAFNHSERQSKSRVGAPTTQTMHDKGLTTQIDWKDKDAYGRSLSSEKRSQMHRLRKW
QERIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALNEDLIRGRSIEGVA
TACLYAACRQEGIPRSLEEVSDVSRVEQKEIGRTYRYVAQELELKMEPVDPKQYVPRFAS
ELDLSEEVQSKANEIIDTTAEQGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVADVAQV
TEVTIRNRYQEQIEAMGIH
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggaacggccgacgcgccagcgggatacggaccaagaggagcgtgagcaggagtccgag
gacactggtcaacaaacttgtcccgaatgtgagtcggagaatatctccagtgacggcggg
ggtgaactcgtctgtgaggactgtgggctggtcatcgaagacgagaacatcgaccgcggg
cccgagtggcgcgcgttcaatcactccgaacgccagtcgaagtcacgcgtcggggcgccg
acgacgcagacgatgcacgataaggggctgaccacacagatcgactggaaggacaaagac
gcctacgggcggtccctgtcctcggagaaacgctcccagatgcaccgtctccgaaagtgg
caggagcgaatccggacgaaagacgccggtgaacgcaacctccagttcgcgctttcggaa
atcgaccggatggcctccgcgcttggcgtcccgcggtcggtgcgggaagtcgcctccgtc
atctatcgacgggcgctgaacgaggacctcatccgaggccgctccatcgagggcgtcgcg
acggcctgtctgtacgccgcctgtcgacaggagggcatcccacgaagtctcgaagaggtc
tcggacgtctcacgggtcgagcagaaggagatcgggcgcacgtaccggtacgtcgcccag
gaactcgaactcaagatggaaccggtcgaccccaagcagtacgtcccccggttcgcctcg
gaactggacctctccgaggaggtccagtcgaaggccaacgagataatcgacaccactgcc
gaacagggcctgctctcggggaagtccccgacgggctatgccgccgccgccatctacgcc
gcgtcgctactctgtaacgagaaaaagacacagcgtgaggtcgccgacgtggcacaggtg
acagaggtcaccatccggaaccggtatcaagagcagatcgaagcgatgggcatccactga
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