Haloarcula sp. JP-L23: G9465_10395
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Entry
G9465_10395 CDS
T06489
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
halj
Haloarcula sp. JP-L23
Brite
KEGG Orthology (KO) [BR:
halj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
halj03032
]
G9465_10395 (gyrB)
03400 DNA repair and recombination proteins [BR:
halj03400
]
G9465_10395 (gyrB)
Enzymes [BR:
halj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
G9465_10395 (gyrB)
DNA replication proteins [BR:
halj03032
]
Prokaryotic type
DNA Topoisomerases
G9465_10395 (gyrB)
DNA repair and recombination proteins [BR:
halj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G9465_10395 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QIO22732
LinkDB
All DBs
Position
2014567..2016495
Genome browser
AA seq
642 aa
AA seq
DB search
MSGESDEYGAKSIQTLEGLEAVRKRPAMYIGSTDARGLHHLVYEVVDNAIDEALAGYCDT
IEVTIHDDGSVSVSDDGRGIPVDEHEEHGRPAVEVVMTILHAGGKFDNKSYQVSGGLHGV
GVSVVNALSKWLEVDVKRDGALWRQRFDHGEPEYELKRVRDLEPDEETGTTVRFWPDDDI
FETGEFTFSTLESRLRELAFLNSGVAITIVDERDGNEETFEYQGGIKEFVEFLNETKDPL
HRDVVYFEDEEEIADGVVQVEIAMQGTADLQGSIHAFANNINTREGGSHLTGFKTSLTRV
VNDYATDNNLLKDLDDTLKGDDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESA
MHDGLSTFFEENPDTAEAIIGKAVEAAKARKAAKKAEELTRRKSALDSTALPGKLADCQT
RDPEEAELFVVEGDSAGGSAKQGRNPEFQAILPIKGKILNVEKHRLDRILENDEIRNLIT
ALGTGIGDEFDIEDLRYEKIIMMTDADVDGAHIRTLLLTLLYRHMKPLIEAGYVYASQPP
LYRIRYRGETYDAMTEEERDRIVEEKCDGNPTQVQRFKGLGEMNPEQLWETTMDPEHRIL
KQITIEDAAAADRMFNILMGDAVEPRKEFIKEHSPEAEWVDI
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagagtctgatgagtacggcgcaaagtctatccagaccttagaagggctggag
gccgtacgcaaacggcctgcgatgtacatcgggtcgaccgatgcccgaggtctccaccat
ctcgtctacgaggtcgtcgacaacgctatcgacgaggccctcgcgggctactgtgacacc
atcgaggtaacgatacacgacgacgggtccgtctctgtcagcgacgacggacgcggtatc
cccgtcgacgaacacgaagagcacggccgcccggccgtcgaagtcgtgatgaccatcctc
cacgcgggcgggaagttcgacaacaagtcctatcaagtctccggcggcctccacggcgtc
ggtgtgagcgtcgtcaacgccctctcgaagtggctggaagtcgacgtcaagcgcgacggc
gcgctgtggcgacagcgcttcgaccacggcgaacccgagtacgaactgaaacgcgtccgt
gacctcgaacccgacgaggagaccggaacgacggtccggttctggcccgacgacgacatc
ttcgagacgggcgaattcaccttctccacgctcgaatcccgtctccgcgaactcgccttc
ctcaactccggtgtcgccatcactatcgtcgacgaacgcgacgggaacgaggagaccttc
gagtaccagggcggaatcaaggagttcgtcgagttcctcaacgagacgaaagacccgctt
catcgggacgtcgtctacttcgaggacgaggaggagatagccgacggcgtcgtgcaggtc
gagatcgcgatgcaagggaccgcggacctgcaaggctcgattcacgctttcgcgaacaac
atcaatactcgcgagggcgggagccaccttaccgggttcaaaacgtcgctgacgcgcgtg
gtcaacgactacgccacggacaacaatctgctgaaagatctagacgacacgctgaaaggc
gacgacatccgcgagggcctcacggcggtcatctccgtgaaacacccggacccgcagttc
gagggccagacgaagacgaaactcggcaacagcgaggtccgcggcatcgtcgagtcggcc
atgcacgacggcctctcgacctttttcgaggagaaccccgacaccgccgaggccatcatc
ggaaaggccgtcgaggcggcaaaggcccgcaaagccgcgaagaaggccgaggaactcacg
cgtcggaagtccgcgctggactcgacggccttacccggaaagctggccgactgccagacg
cgggaccctgaggaggccgaactgttcgtcgtggagggcgactccgccggcggcagtgcc
aaacagggacggaatcccgagttccaggccatcctccccatcaaagggaagattctgaac
gtcgagaaacaccgtctcgaccgcattctggagaacgacgagattcggaacctcatcacg
gcgctgggtaccggcatcggcgacgagttcgacatcgaggacctccgttacgagaagata
atcatgatgacggacgccgacgtcgacggcgcccacatccgcaccctcttgctgacgctc
ctctatcggcacatgaagccgctcatcgaagcgggctacgtctatgcctctcaaccgccg
ctgtatcgcatccgctaccggggtgagacgtacgacgcgatgaccgaggaggaacgggac
cgcatcgtcgaggagaaatgcgacggcaacccgacgcaagtccagcggttcaaaggtctc
ggggagatgaaccccgaacagctatgggagacgacgatggacccggagcaccgaatcctg
aagcagataactatcgaagacgcggcggccgccgaccggatgttcaacatcctgatgggc
gacgccgtcgagccacggaaggagttcatcaaggaacactcgcctgaagcggagtgggtc
gacatatga
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