KEGG   Haloarcula sp. JP-L23: G9465_13750
Entry
G9465_13750       CDS       T06489                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
halj  Haloarcula sp. JP-L23
Brite
KEGG Orthology (KO) [BR:halj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:halj03400]
    G9465_13750
Enzymes [BR:halj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     G9465_13750
    5.6.2.6  RNA 3'-5' helicase
     G9465_13750
DNA repair and recombination proteins [BR:halj03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    G9465_13750
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C WH_Lhr ResIII AAA_25 DEXQc_Suv3 AAA_19 HypA Zn_ribbon_8 Zn_ribbon_PaaD Zn_ribbon_Brz
Other DBs
NCBI-ProteinID: QIO23359
LinkDB
Position
2642472..2645306
AA seq 944 aa
MTDGVTQGQDAFTALGDAVRAALSERGFTTPTEPQRKAIPALARGDDALVVAPTGTGKTE
TAMLPVLDALVEDGDRFGIGALYITPLRALNRDMRERLEWWGETLGLDVDVRHGDTTDYQ
RQKQANDPPDVLVTTPETLQAMLTGSKLRVALEDVDHVVVDEVHELAAAKRGAQLTVGLE
RLREVAGRFQRVGLSATVGDPEEVGRFLTGGGPCSVVEVDIGSRLDVEVVRPQVTDRDER
LSSELVTDAETASHVRYIDDLIAEKESVLLFVNTRQTAEALGSRFKELGTNLGVHHGSLS
KEARIDVEDRFKAGDLDALLCTSSMELGIDVGHVDHVVQYGSPRQVSRLVQRVGRAGHRR
DEVSTGTVVTTHADDTLEALAIARQAQAGDVEPAQIHDGSLDTVANQIAGLVMDTGEVRA
MAAYHVLARAYPFRDLGEAEFKEVVRELAENNVVWLDEERDTLEKRRGTWQYFYQNLSMI
PDEATYEVEDVASGKQVGTLDERFVVNFATPGEVFVQRGEMWRITHIDEEEEVVTVSPIE
DPAGEVPSWTGSEIPVPQAVAQEVGELRRVAGSQLQDGAPVDSVASHVAARYDGDHETVA
DGLSQLADHEGPIPDDGTVLVEFHGREVVVNSCYGHTVNETLGRVLSALLGQRAGSSVAM
EVDPYRIGLEVPRRITAGDVIEVLEETDPDHIPALVELSLKNADALKFKLAQVATKFGSL
KRWRGRGSTEFGRDRLLAALEDTPMYEEALREVRHEDLAIEATATLLERLQSGEVALETV
AERTPVGLGGRSSGRELLSPENADASVIQTVRERIQSDRVILLCLHCQDWDRKQQVGRVR
DQPACPKCGSTRVAALNPWADEVVSAVRADEKDEEQEKMTERAYRAGSLVQTHGKQAVVA
LAARGVGPHNAARIINRLREDEDEFYRDILRQEREYARTQSFWG
NT seq 2835 nt   +upstreamnt  +downstreamnt
atgaccgacggggtgacacagggtcaagacgcgttcacagcgctgggcgacgcggtgcgg
gccgccctctcggagcgcggattcacgacgccgacggagccacagcggaaggccatcccg
gcgctcgcccgcggcgacgacgccctcgtggtcgcccccaccggcaccgggaagacggag
acggcgatgctcccggtgctggacgccctcgtcgaagacggcgaccggttcggcatcggc
gcgctctacatcacgccgctccgggcgctcaaccgcgacatgcgtgagcgactggagtgg
tggggcgagacgctcggtctggacgtcgacgttcgccacggcgacaccaccgactaccag
cgacagaagcaagccaacgacccgccggacgtgctggtgacgacgcccgagacgctgcag
gcgatgctcaccgggtcgaaactccgcgtggcgctggaggacgtcgaccacgtcgtcgtc
gacgaggtccacgaactcgccgccgcgaagcgcggcgcccagttgaccgtcgggttagag
cgcctgcgagaggttgcaggccggttccagcgcgtcggcctctcggcgaccgtcggcgac
cccgaggaggtcgggcgctttctcaccggcggtggcccctgttcggtcgtcgaggtggac
atcggcagtcgtctcgacgtcgaggtggtccgcccgcaggtgaccgaccgggacgaacgt
ctctccagcgaactcgtcaccgacgccgagacggccagtcacgtccgctacatcgacgac
ctgatagccgagaaggagtcggtcctgctgttcgtgaacacgcgccagacggcggaggca
ctcggctcgcggttcaaggaactggggacgaacctcggggtccaccacgggtcgctctcg
aaggaggcccgcatcgacgtcgaggaccggttcaaggccggcgacctcgacgccctgctg
tgtacctcctcgatggaactgggtatcgacgtgggccacgtcgaccacgtcgtccagtac
gggagtccgcggcaggtgtcccgattggtccagcgcgtcggccgtgccggccaccgccgc
gacgaagtgtcgacgggaaccgtcgtcacgacccacgccgacgacacgctggaggcgctg
gccatcgcccggcaggcgcaagcaggcgacgtggaacccgcacagattcacgacgggagc
ctcgacaccgtcgccaaccagattgccggcctcgtgatggacaccggcgaggttcgcgcg
atggcggcctaccacgtcctcgcgcgggcgtacccgttccgtgacctcggggaagccgag
ttcaaggaggtagtgcgggaactggccgagaacaacgtcgtctggttggacgaggagcgc
gacaccctagagaagcgccgcggcacgtggcagtacttctaccagaacctctcgatgatt
cccgacgaggccacctacgaagtggaggacgtggcctccggcaagcaggtcgggacctta
gacgaacgcttcgtcgtcaacttcgccacccccggcgaggtgttcgtccagcgcggcgag
atgtggcgcatcacccacatcgacgaggaggaggaagtggtgaccgtctcgcccatcgag
gaccccgccggcgaagtgccgtcgtggaccgggtccgagattccggtgccacaggccgtc
gcacaggaggtcggcgagttgcgccgtgtcgccggcagccagttacaggacggagcgccg
gtcgattcagtcgcctcccacgtcgccgcccggtacgacggcgaccacgagacggtcgcc
gacggtctctcgcaactggcggaccacgaggggccgattcccgacgacgggaccgtcctc
gtggagtttcacggccgggaagtagtcgtcaattcgtgttacggccacaccgtcaacgag
acgctgggtcgcgtcctctcggcactgctgggacagcgggccgggtcctcagtcgccatg
gaggtcgacccctaccgcatcgggcttgaagtcccccggcgaatcaccgccggtgacgtc
atcgaggtactggaggagacggaccccgaccacattcccgccttggtggagttgagcctg
aagaacgccgacgcgctgaagttcaaactcgcacaggtcgcgaccaagttcgggtcgctc
aagcgctggcgcggccgcgggtcgacggagttcggacgggaccgcctgttggccgcgctg
gaggacacgccgatgtacgaggaagccctgcgggaggttcggcacgaggacctcgctatc
gaagcgacggcgacgctcctcgaacgcctccagtccggcgaggtggcgctggagacggtg
gccgagcggacccccgtcggcctcggcggtcgttcgtcgggccgtgaactgctctcgccg
gagaacgcagacgcgagcgtcatccagacggtcagagagcgcatccagagcgaccgggtc
atcctgctctgtctgcactgtcaggactgggaccggaaacagcaggtcggccgggttcgt
gaccagccagcgtgtcccaaatgcgggtccacccgcgtcgccgcgctgaacccgtgggcc
gacgaagtcgtctcggcggtgcgggccgacgagaaggacgaggagcaagagaagatgacc
gagcgcgcctaccgcgccggatcgctcgtccagacccacggcaagcaggccgtcgtcgcc
ctcgccgcgcggggggtcggcccgcacaacgccgcgcgcatcatcaaccgcctgcgggag
gacgaagacgagttctatcgggacatcctccgacaggaacgagagtacgccagaacgcag
tcgttctggggctaa

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