Haloarcula sp. JP-L23: G9465_14230
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Entry
G9465_14230 CDS
T06489
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
halj
Haloarcula sp. JP-L23
Pathway
halj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
G9465_14230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halj03021
]
G9465_14230
Transcription machinery [BR:
halj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
G9465_14230
Prokaryotic type
Archaeal type
TFB
G9465_14230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Trm112p
Zn_ribbon_tTFIIB
HTH_Tnp_ISL3
A2L_zn_ribbon
Cyclin_C
DZR_2
BRF2-like_C_cyclin_rpt
DZR
Auto_anti-p27
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
QIO23442
LinkDB
All DBs
Position
2736897..2737871
Genome browser
AA seq
324 aa
AA seq
DB search
MTDTTIRRYTNENETDVDETTEEADEGLVCPECGGSLLSDSERGETVCEDCGLVVEEDEI
DPGPEWRAFDSKEKDQKSRVGAPTTNMMHDKGLSTNIGWQDKDAYGNSLSSRQREKMQRL
RTWNERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALDEDLLPGRSIE
GVSTSSLYAAARQAGTPRSLDEIANVSRVDKDEIARTYRYVVRELSLEIQPADPESYVPR
FASDLDLSEEVERRARQLLKNAKEEGVHSGKSPVGLAAAAVYAASLLTNEKVTQSEVSEV
ANISEVTIRNRYHELLEAEDSVHP
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataccaccatccgccgatacacgaatgaaaacgaaaccgacgtcgacgagaca
acagaggaggcagacgagggactcgtctgtcccgagtgtggtggctctctgctctccgac
agcgagcgcggcgaaaccgtctgtgaggactgtgggctggtcgtcgaggaagacgagata
gaccccggccccgagtggcgggcgttcgactcgaaggagaaagaccagaagtcccgcgtc
ggcgcgccgacgacgaacatgatgcacgacaagggcctgtcgaccaacatcggttggcag
gacaaggacgcctacggcaactccctgtcctcgcgccagcgcgagaagatgcagcgcctg
cgcacctggaacgagcgcttccgcacccgtgactccaaagagcgcaacctcaagcaggcg
ctcggcgagatcgaccggatggcctccgcgctcggcctccccgagaacgtccgcgagacg
gcttctgtcatctaccgccgagcgctcgacgaggacctgctccccggccgctccatcgag
ggcgtctcgacgtcgtcgctgtacgccgccgcccgacaggccggcaccccgcggtcgctc
gacgagattgccaacgtctcccgggtcgacaaagacgagatcgcccgtacctaccgctac
gtcgtccgggaactcagtctcgaaatccagcccgccgaccccgagagctacgtcccccgc
ttcgcctccgacctggacctctccgaggaggtcgaacgccgcgcccgccaactactgaag
aacgccaaagaggagggcgttcactccgggaagtcccccgtcggcctcgccgcggccgcg
gtgtacgccgcctcgctgctgaccaacgagaaggtcacccagagcgaggtcagcgaagtc
gcgaacatctccgaggtcaccatccgcaaccgctaccacgaactgctggaagccgaggac
agcgtccacccctga
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