Haloarcula sp. JP-L23: G9465_16600
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Entry
G9465_16600 CDS
T06489
Name
(GenBank) RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
halj
Haloarcula sp. JP-L23
Brite
KEGG Orthology (KO) [BR:
halj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
halj03016
]
G9465_16600
Enzymes [BR:
halj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
G9465_16600
Transfer RNA biogenesis [BR:
halj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
G9465_16600
Prokaryotic type
G9465_16600
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
DKCLD
PUA
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
QIO23878
LinkDB
All DBs
Position
complement(3163912..3164802)
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AA seq
296 aa
AA seq
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MTLRGPPDDRDVDALLSFGVVNLDKPPGPSAHQVAAWVRDATGQDRVAHGGTLDPKVTGC
LPILLGDAARAARVFDEAIKEYVAVLELHDRAPADFGTVVAEFEGDIYQKPPRKSAVKRQ
LRTRRIHDLDVLEREDRRALLRVRCASGTYIRKLCHDIGLALGTGAHMGDLRRTATGTFD
DADLVTMHDLVDALAVAEAGEATPLRKVVQPAERALVALPAVTIAPSAARAVADGAPVYA
PGVIDVGPAEVGGAPPEEGTLVACYTPDDAAVCLGTLVGDPEADAGTVVELERVLV
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgacgctccgtggcccacccgacgaccgcgacgtcgacgccctgctctcctttggcgtc
gtcaacctcgataagccccccggcccctccgcccatcaggtcgccgcgtgggtccgggac
gccaccggacaggaccgggtggcccacggtggcacgctcgacccgaaggtcacgggctgt
ctcccgattctactcggcgacgccgcccgcgcggcccgcgtcttcgacgaggctatcaag
gagtacgtcgccgtgttggaactccacgaccgcgctcccgcggacttcgggaccgtcgtc
gccgagttcgagggcgacatctaccagaaaccaccgcgaaagagcgccgtcaagcggcaa
ctgcggacccgacggattcacgacctcgacgttctcgaacgcgaggaccgccgggcgctc
cttcgcgtgcgctgtgcctcggggacctacatccgcaaactgtgtcacgacatcggactg
gcgctcgggacgggcgcgcacatgggcgacctgcgccggactgccacaggcaccttcgac
gacgccgacctcgtgacgatgcacgacctcgtcgacgcgctcgccgtcgccgaggctggc
gaggcgacgccgctccgcaaggtggtccagccagcggaacgcgctctcgtcgcgcttcca
gcggtgacaatcgcccccagcgctgcccgtgcggtggccgacggcgcgccggtgtacgcc
cccggtgtcatcgacgtcggtcccgccgaggtcggtggtgccccgccggaggaagggaca
ctcgtcgcctgctacacgccggacgacgcggccgtctgtctcggcacgctggtcggggac
cccgaggccgacgccgggaccgtcgtcgaactcgaacgcgtcctcgtctga
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