Haloarcula sp. JP-L23: G9465_18300
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Entry
G9465_18300 CDS
T06489
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
halj
Haloarcula sp. JP-L23
Pathway
halj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
G9465_18300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halj03021
]
G9465_18300
Transcription machinery [BR:
halj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
G9465_18300
Prokaryotic type
Archaeal type
TFB
G9465_18300
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_19
DZR_2
DZR
Zn_ribbon_15
Motif
Other DBs
NCBI-ProteinID:
QIO24414
LinkDB
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Position
3501585..3502664
Genome browser
AA seq
359 aa
AA seq
DB search
MSTNASEKTVSDEQTTTTEQCSREVTIEREPASRSACPECDGRVVTHDEESFCADCGLVV
AAEWVDRSPTLVDLGLVGNADQSIETVDPLRTDKGLHTKIGKSTDGHGNPLSNEQWKKFQ
RLRKWHKRSQFDAGRKRSKRLNEGLRDVEMIGGNLDLPDHVVKTAAQYLRRASEARLAGG
RMAWEALAGGAVLLAARGSKIDRDEIDIDVATYTKAPHERVCAAARKIRCELGVDTVPVT
RPNAVLTVVDALDDDALSGSAAVRTWRLAQHLMYFGDQVPVGPGTSRLTIAAAALYGADR
LTPQKRLTQGQVAAAASTVVPTSTHRLSRYNCELVDAYEARHGTKNLDVVLKQEPDILH
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaccaacgcgagcgaaaagacggtttcggacgaacagacaacaaccactgagcag
tgtagtcgtgaggtcacgatcgagcgggagccggcgagtcggtcggcgtgtccggagtgt
gatggccgagtggtgacccacgacgaggagtcgttctgtgcggattgtggcctggtcgtc
gcggccgagtgggttgaccgaagcccgacgctggtcgatctgggtctggtcgggaacgcc
gaccagagcatcgagacggtggatccgctccggacagacaagggcctccacacgaagatt
gggaagagcaccgatggacacgggaacccgctcagtaacgagcagtggaagaagttccag
cgcctccggaagtggcacaagcgctcccagttcgatgcgggccgcaagcggtcgaaacgg
ctcaacgaaggactgcgggacgtcgagatgatcggcggcaatctggatctgcccgatcac
gtcgtcaagacagcagcacagtacctgcgacgcgcctcggaggcccggttggccggcggg
cggatggcctgggaggcactcgccggcggtgccgtcctacttgcagcgcgcggatcgaaa
attgatcgtgacgagatcgacatcgacgtggcgacctatacaaaggcgccccacgagcgg
gtgtgtgctgcggcgcggaagatccggtgcgaactcggggtcgacacagtccccgtcacc
cgaccgaacgccgtgctgacggtcgttgacgcgcttgatgacgacgcactctcggggagt
gcagccgtgcggacgtggcggttggcgcaacacctcatgtacttcggcgaccaggtgccg
gtcggaccggggacgtcgcggctcaccatcgcggcggcggcactctacggcgcggatcgg
ttgacgccccagaagcgactcacccaggggcaggtggcggcggcggccagtacggtcgtg
ccgacgtcgacacatcggctcagtcggtacaactgcgaactcgtcgacgcgtacgaagcc
cgacacgggactaaaaacctggatgtcgtcctcaagcaagagccggacatcctgcactga
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integrated database retrieval system
