Haloarcula sp. JP-L23: G9465_20365
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Entry
G9465_20365 CDS
T06489
Name
(GenBank) PAS domain S-box protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
halj
Haloarcula sp. JP-L23
Brite
KEGG Orthology (KO) [BR:
halj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
halj03000
]
G9465_20365
Transcription factors [BR:
halj03000
]
Prokaryotic type
Helix-turn-helix
Other families
G9465_20365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
GAF_2
PAS_4
HTH_10
GAF
GAF_3
PAS_9
Response_reg
PAS
PAS_8
PAS_7
Motif
Other DBs
NCBI-ProteinID:
QIO24855
LinkDB
All DBs
Position
unnamed1:complement(353912..356767)
Genome browser
AA seq
951 aa
AA seq
DB search
MSNLIHPLHSYNASAIGQLNQSGQLATVHTAETAANALDAVRDGLVDCVVTAYALDETTG
VELVEAVRSEGSAVPVLLGTANGNETIASEAIASGVTDYIVVTEPIGRTVDTVLNRTEEA
LRTTSQADVQRDRAQQFDAVFNDTQTATWVLDPDGTLVRANERAREMIDVDAEAVLGEPF
WTLPWWSHTAAMQDDVRQLVEETRDGTAGNSILSEPPDSESQRVIDLSVRPVENERGDLT
SIVIRGVEITERVSLERDLRQSEELHRVTLNNMTDTVLITDEDGEYTYVCPNVHFIFGYT
AAEIRNGGTIDDLLGEDLFDRDELAATGSLKNIECTATDKAGREHTLLVNVRAVDIQGGK
FLYSCRDITKRKQREEALATLQELARGFLYAGTHDEIAQHIVEDSPSALDLEATAIYLFD
ADTNELRPATHSQTMRDLHGPLPRIHADGDSLPGYAFIEGTALFFDDVHEADRLDNRATD
LRSAGYVPLGDHGIFVAGSPDVAAFDDVTRELADLLAATAEAALDRVRRESQLRAQDRQL
QQQNEQLTALNRINETIRAIDRAIVQAETRDEIDHTVSELLTSDERFSFAWIGGVDSTTD
TLEPRAWAGDEQGYLDSQVFTVDASGTEPAGKTAATGDVTMVPNVATNLREDEWRADALT
RDFMSVLSIPLVYNDLTHGVLTVYADTRDAFDETARAVLAELGETIASALSAIERKNALL
TTSLTRVAFEIDDETFILSRLARVADCTLSYQGGVQQTTDGSYVFVTVEDAAVETVAAAA
SELAGIDDVRQISEESDGGVLRLGLGRPFLALELADHGAVFREATADATSTTLTIDVPDS
IDVRNISQLVDEAFSDVELHSKQTFDQAAEHDVYTRFLSDLTERQLEVVQTAYYSGFFES
PRESTGEDVATMLDISPPAFYQHVRTVQRKLFTTLFEEQSVSVAASGGRVQ
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atcagtaatctgattcatccgcttcactcctacaacgcgtcagctattggtcagttgaat
cagagtggacaactagcgacagtacacacggccgagacggcagcgaacgcgctcgacgcc
gtccgggacggcctcgtcgactgtgtcgtcacggcgtacgcgctcgatgagacgaccggt
gtcgaactcgtagaagcggttcgaagcgaagggtcggcggtacccgttctcctcgggacg
gccaacgggaacgagactatcgccagcgaagcgatcgcgtccggcgtcaccgactatatc
gtggtaacggagccgatcggccggacggtcgatacggtactgaaccgtaccgaagaggcg
ctccgtaccacgtcgcaggcggacgtccagcgcgaccgagcacagcagttcgacgcagtg
ttcaacgacacgcagacggcgacgtgggtgctagaccccgacgggacgctcgtccgtgcg
aacgagagggcgcgtgagatgatcgacgtagacgccgaagcggttctgggtgagcccttc
tggacgctgccgtggtggtcacatacggcggcgatgcaggacgacgtccgacaactcgtc
gaggagacgcgggacgggaccgccggcaactcgatactctccgaaccaccggacagcgaa
tcccagcgcgtcatcgatctgtccgttcgccccgtcgaaaacgaacgcggcgacctcacg
tcgatcgtgatcaggggcgtcgagataacggaacgggtctcgctcgaacgcgacctccgg
cagtccgaggaactccaccgagtgacactcaacaacatgaccgacaccgtcctcatcacg
gacgaggacggcgagtacacgtacgtctgtcccaacgtccacttcatcttcggatacacg
gcagcggagattcgcaacgggggaacgatcgacgacctcctcggcgaggacctcttcgac
cgcgacgaactcgcagcgaccgggagcctgaagaacatcgagtgtacggcgacagacaag
gccggccgtgagcacacgctgctcgtcaacgtccgagcggtcgacattcagggcggtaag
ttcctctatagctgtcgagacatcacgaaacgcaagcaacgcgaggaggcgctcgcgacg
cttcaggaactggcgcgtgggttcctgtacgccggaacgcacgacgagattgcccaacat
atcgtcgaagactcgccgagcgccctcgatctcgaggcgactgcgatatatctgttcgac
gccgacaccaacgaactccggcccgccacacactcacagaccatgcgcgacctccacggc
ccactgccgaggattcacgccgacggtgactcacttccggggtacgcgtttatcgaaggg
acggcgctgtttttcgacgacgtccacgaggcagaccgactcgacaaccgggccacagac
ctcagaagtgcgggctacgtcccgctgggcgaccacggtatcttcgtcgcagggtctccg
gacgtcgccgcgttcgacgacgtcacccgagaactggcagacctgctcgcggcgaccgcc
gaggcagcgctcgatcgggtcagaagggagtcacagctccgcgcacaggacagacagtta
cagcagcaaaacgaacagctcacggcactgaaccgtatcaacgagacgatcagagccatc
gatagggcgatcgttcaggcggagacgcgtgacgagatcgaccacaccgtcagcgaactg
ctgaccagtgacgagcggttcagtttcgcctggatcggcggcgtcgattcgacgaccgac
accctcgaaccacgggcgtgggcgggggacgaacagggatacctggatagtcaggtgttc
accgtcgatgcgtcgggcaccgagccagccgggaagacagcggcgaccggcgacgtgacc
atggttcccaacgtcgcgaccaatctccgggaagacgagtggcgggcggacgcgctcacc
cgcgatttcatgtccgtgctgagtatccccctcgtgtacaacgatctcacgcacggcgtc
ttgaccgtctacgccgatacccgggacgcgttcgacgagaccgcccgcgccgtactggcc
gaactcggggagacgatcgcctccgcgctcagtgctatcgagcggaagaacgccctcctc
acgacgtcgctgacgcgtgtcgcgttcgaaatcgacgacgagacgttcatcctctcccgt
ctcgctcgggtggccgactgcaccctctcgtatcaggggggcgtacagcagacgacagac
gggagttacgtgttcgtcaccgtcgaggacgctgccgtcgagaccgtggcggccgccgca
tccgagctagccggcatcgacgacgtccgacagataagcgaagaaagcgacggcggtgtc
ctgcggctgggactcgggcggccgtttctcgcactggagttggccgaccacggcgccgtc
ttccgggaggcgactgccgatgcgacgtcgaccacactgaccatcgacgtcccggacagt
atcgacgtccggaacatctcgcagttggtcgacgaagcgttctccgacgtcgaactccac
agcaagcaaacgttcgaccaagccgccgaacacgacgtctacacgcggttcctctctgac
ctcaccgaacggcaactcgaagtcgttcagacggcctattacagcggctttttcgagtcg
ccgcgcgagagcaccggtgaagacgtcgcgacgatgctcgatatctctccgccagcgttc
taccagcacgtccggacggtccaacggaaactgttcacgacgctcttcgaggagcagagc
gtctcggttgcagcatcgggcggcagggttcaatag
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