Haloarcula sp. JP-L23: G9465_23865
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Entry
G9465_23865 CDS
T06489
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
halj
Haloarcula sp. JP-L23
Pathway
halj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
G9465_23865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halj03021
]
G9465_23865
Transcription machinery [BR:
halj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
G9465_23865
Prokaryotic type
Archaeal type
TFB
G9465_23865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cas12f1-like_TNB
HTH_23
Zn_ribbon_Top1
FYVE
Zn_ribbon_TFIIB
DZR_2
Zn_ribbon_6
DZR
DUF1272
Motif
Other DBs
NCBI-ProteinID:
QIO25312
LinkDB
All DBs
Position
unnamed3:complement(177640..178536)
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AA seq
298 aa
AA seq
DB search
MASSTVQQESDVSTQQCPECGGDLVQDAHETHCGACGLVVEDDPVDHGPEWRSFDREGRK
RTGAPRTVTLHDRGLSTDIGTGGADVSSRKQRRLSRQRRLHSRAKFESKRERNLSHGLGD
IRRLVGALDQSDAVQQQASTLFKQAQDANLLIGRSIESGAAAAVYAAGRCHIVIRMADVV
DVARCYACDAWGTYRTFQRELEIPIPVQLPVDWVPTVISELPLTVSPALRQDATQLAATA
TDSAVLNGNPIGIAAGAVYLAGTDADLRLTQETISEAVDISPVTVRAWYQRLAELADE
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgagcactgtccagcaggagtcggacgtatcgacacagcagtgtccagaatgt
ggtggtgacctcgttcaggacgcgcacgaaactcactgtggagcgtgtggcctcgtcgtc
gaggacgatccagtcgaccacgggcccgagtggcggtcgttcgaccgcgagggacgcaag
cgaaccggtgcaccacggacggtcaccctccacgacagaggcctatccactgacatcggg
accggcggagccgatgtctcgtcccggaagcagcgtcgactctcccggcagcggcgactg
cactctcgagcgaagttcgagtccaagcgagaacgcaatctgtcacatggcctcggagat
atccgacggctggtcggagcgctagaccagagtgacgcggtccaacagcaagcgtcgacg
ctgttcaaacaggctcaagatgcgaacctgctcatcggtcggtcgatcgaaagtggcgct
gcagccgcagtgtacgctgccggtcggtgccatatcgtcatccggatggctgatgtcgtt
gacgtcgcccgctgttacgcatgcgacgcttgggggacgtaccgaacgttccagcgtgag
cttgagataccgattccggtgcaactcccggtcgactgggtcccgacagtgatctcggag
cttccactcacggtgtcgccggctcttcgacaggacgcaacccaattggcagcgaccgcc
actgactcggcggtgctgaacggcaatccgatcggcatcgctgccggcgctgtatatctg
gctgggacggacgctgacctgcggctgacacaggagacaatcagcgaggccgtagatatc
tcgccggtcaccgtccgagcgtggtatcagcggcttgcagagctcgctgatgagtga
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