Vreelandella alkaliphila: CUU95_00905
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Entry
CUU95_00905 CDS
T05720
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
halk
Vreelandella alkaliphila
Brite
KEGG Orthology (KO) [BR:
halk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
halk03016
]
CUU95_00905
Enzymes [BR:
halk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CUU95_00905
Transfer RNA biogenesis [BR:
halk03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CUU95_00905
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
DUF1822
Motif
Other DBs
NCBI-ProteinID:
AYF35697
UniProt:
A0AAJ2S3B2
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All DBs
Position
181816..183756
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AA seq
646 aa
AA seq
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MLQNNSLLAQLKQQIRDTTPRAEGVIKATEKGFGFLETDSGESYFVPPPAMKQVLHGDRV
EAVIHENGDKKSVEPEKLIEAGLDRFVARVQKREDRLAVVPDHPSIRNVLKARIKNSLDE
ATIADGDWVVARLVRHPLKENDRGFFTQIDELVAKADDPAVPWRVTLARHALEQECPDAG
TEWPLHDEGLTREDLTAQPFFTIDGEKTRDMDDALHVEALESGGWRLSVAIADPTAYVEE
GHAADLEARTRAFTVYLPGQNVTMLPEQLADDLCSLWEGQDRPALACSLDINADGSLGDY
RFFAANVKSHAKLVYDRVSDWIDGQGEWAPADNIAEQLKALRDLTEARTAWRNEHALVFK
DRPDYVFDLDDAGNVLGIRTEDRRIANRMIEESMIAANACCADFLAKHIGHGIFNVHRAF
EPEKAESAQEFLATQEIEVAQEALTELAHYKELKRALESRDDAWLDARLRRFQGFTSMSA
QPGPHFGLGLPAYATWTSPIRKYGDMVNHRLIKRVLKGEQAPAEASQQLTEQLTERRRLN
RMAERDVKDWLYVRYLTPAAQNQDAFDAEIMAINRGGMRVRLLENGATAFVPAPLMHSDR
DKVVIDDKEGRIQIEGEERYKLGDSLRIALTEAREETRSLVAKPTE
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaaaacaactcattgcttgcccagctcaagcaacagatccgtgataccacccca
cgcgctgaaggggtgataaaagccaccgaaaaaggcttcggtttccttgaaaccgacagc
ggtgaatcttatttcgtgccgccccccgccatgaagcaagtactccatggcgatcgcgtc
gaggcggtgatccatgaaaacggcgacaaaaagtccgtagagcctgaaaagctgatcgaa
gctgggcttgaccgctttgttgcccgtgttcagaagcgcgaagaccgtttagccgttgtg
cccgaccatccgtcgattcgcaatgtgctgaaggcgcgcataaagaacagcctggatgaa
gccaccattgctgatggcgactgggttgtcgcgcggctggtacgccacccgctgaaagag
aacgatcgcggcttcttcacgcaaattgatgagctagtggctaaggccgacgatcccgcc
gttccgtggcgcgtcacccttgcccgccatgcgctggaacaagagtgcccggacgccggt
accgagtggccactgcatgatgaagggttaacccgtgaagacctcacggcgcagcccttc
tttactatcgatggcgaaaaaacccgcgacatggacgacgcgctacacgtggaagcgctg
gaaagcggcggttggcggctaagcgttgcgatcgctgacccaacggcctacgttgaagaa
ggccatgcggccgaccttgaagcgcgcacccgtgcattcacggtctacctacccggccag
aacgtgaccatgctgcctgaacagctggcagatgacctctgctcgctatgggaaggtcag
gaccgccctgcccttgcctgctcgctggacattaatgctgacggcagcttaggtgattac
cgcttttttgcggctaacgtaaaatcccacgccaaactagtctatgaccgcgtttccgac
tggattgacggtcaaggcgagtgggctcccgctgacaatatcgctgaacagctgaaagca
ctgcgcgatttgaccgaagcgcgcaccgcttggcgcaacgaacatgcgctggtgtttaaa
gatcgtcctgattacgttttcgacctggacgacgcgggcaacgtcttaggcattcgcacc
gaagatcgccgcattgccaaccgtatgattgaagagtcgatgattgccgctaacgcttgc
tgcgcggacttcctcgccaaacatatcggtcacggtatctttaatgtgcaccgcgctttt
gagcctgaaaaagccgaatctgctcaagagttcttagcaactcaggagattgaagtcgcc
caggaagcgctgactgagctagctcactacaaagagctgaagcgcgctctggaaagccgt
gatgatgcctggctggacgcgcgcctacgccgcttccaaggctttaccagcatgtcagct
caacctggcccgcactttggtcttggactaccggcttatgccacctggacgtcgccaatt
cgtaagtacggcgatatggtcaaccatcgtttgatcaagcgtgtgcttaaaggtgaacag
gctccggcagaagccagccagcagctcaccgagcaactcaccgagcggcggcgcctgaac
cgtatggcagaacgcgacgtaaaagattggctctacgttcgctacttaacgccagcggct
caaaaccaagacgccttcgacgcagagatcatggcgatcaaccgcggtggtatgcgagta
cgcctgttggaaaatggtgctaccgccttcgtacccgccccgctaatgcacagcgatcgc
gataaagtggtcattgatgataaagagggtcgcattcagatagaaggcgaagagcgctac
aagctgggcgacagcctgcgcattgcgctaacagaagcccgtgaggaaacccgctcgctg
gtcgccaaacccacagagtaa
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