Vreelandella alkaliphila: CUU95_03720
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Entry
CUU95_03720 CDS
T05720
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
halk
Vreelandella alkaliphila
Pathway
halk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
halk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CUU95_03720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halk03400
]
CUU95_03720
Enzymes [BR:
halk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
CUU95_03720
DNA repair and recombination proteins [BR:
halk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CUU95_03720
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CUU95_03720
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CUU95_03720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AYF32993
LinkDB
All DBs
Position
complement(795243..796736)
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AA seq
497 aa
AA seq
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MAPPNAAPASFLWHDYETFGADPRRDRPAQFAALRTDAELNEIGEPIELYCKPADDYLPH
PAACLITGITPQKAQRKGLPEGEFARQIQGFMSEPGTCVVGYNSLRFDDEISRHLFYRNL
LDPYSREWQNGNSRWDLIDVVRAFYALRPEGIEWPQREDGAPSFKLEHLTAANGIAHEGA
HDAVADVRATIALARLLKARNPKLFDYLLGMRGKRAVAKQLDLPSAKPLLHISRRYPASR
GCSALVMPLAEHPTNPNGVIVYDLSVDPSDLLTMSAEQIRERVFVSQQDLSEGEVRIPLK
VIHINRCPVIFPATVLKDVDGPHKGEYGTIIERLTIDIDACRGHWKTLREASGVAQKVAE
VFNAAYEDVPQDPDLMLYSGSFFSAADRQQMERALAMDPWDLVGQRFAFQDPRLEEMLFR
YRARSYPDTLEGEEREQWDAFRWTRINDPALSGFTLKAFAREIERYNQQILSDRERQVLE
ELVMYVESMMPAQAFDA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcgccacctaatgctgcccctgccagttttctctggcatgactatgagacatttggt
gctgatccgcgtcgcgatcggcccgctcagtttgccgcattacgcactgacgccgagctt
aatgaaatcggtgagccgatagagctctactgcaaacctgctgatgactacctgcctcac
cctgctgcttgcctcattaccggtattacaccgcaaaaagcgcagcggaaaggcttgcct
gagggggagtttgcccgccagatccaaggctttatgagtgagccaggcacttgcgtggtg
ggctataacagccttcgctttgatgatgaaatctcccgccacttgttttatcgcaacctg
cttgacccttattcccgcgaatggcaaaacggcaattcccgttgggacttgattgatgtg
gtgcgcgcgttttacgccttgcgccccgagggcattgagtggccgcagcgggaagatggt
gcgcctagcttcaaacttgagcacttaacggcggccaatggcattgcccatgaaggtgct
catgatgcggtagctgatgtacgtgccaccattgcgctggcgcgtctgctaaaagcccga
aacccaaaattattcgactatttactgggcatgcgtggcaagcgtgcagtggccaagcag
ttagacttgcctagcgctaaaccgcttttgcatatctcccgtcgttaccctgccagccgt
ggctgtagtgcattagtcatgccgctggccgagcatccgacgaatcctaatggcgttatt
gtttacgatttaagcgttgatcctagtgatttgctgaccatgagtgccgagcaaatcaga
gaacgtgtgttcgtcagccagcaggacctttccgagggggaagtgcgtataccgctgaaa
gtgatccacattaatcgctgcccagtcatctttccagcgacggtgttaaaagatgtggat
ggcccccataaaggcgaatacggcacgatcattgagcggttaacgattgatattgatgcc
tgtcgcggccattggaaaacgttgcgagaggctagcggtgtggcgcaaaaagtagctgag
gtatttaacgcagcctacgaagatgtgcctcaagaccctgacttaatgctctattccggc
agctttttctctgcggctgatcgccagcaaatggagcgagcattggcaatggatccctgg
gatttagtcggccagcgctttgcctttcaagatcctcgcctggaggaaatgttgtttcgc
taccgtgcgcgtagttatccagacacgctggagggcgaagagcgcgagcagtgggatgcg
tttcgctggacgcgtatcaatgatccggccttgtcgggttttacgctgaaagcctttgcg
cgagagatagagcgttataaccagcagatcctatcggatcgcgagcgccaagtgctggaa
gagttggtgatgtacgttgagtcgatgatgccagctcaggcgtttgatgcctga
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