Vreelandella alkaliphila: CUU95_03885
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Entry
CUU95_03885 CDS
T05720
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
halk
Vreelandella alkaliphila
Pathway
halk00260
Glycine, serine and threonine metabolism
halk00460
Cyanoamino acid metabolism
halk00630
Glyoxylate and dicarboxylate metabolism
halk00670
One carbon pool by folate
halk00680
Methane metabolism
halk01100
Metabolic pathways
halk01110
Biosynthesis of secondary metabolites
halk01120
Microbial metabolism in diverse environments
halk01200
Carbon metabolism
halk01230
Biosynthesis of amino acids
halk01240
Biosynthesis of cofactors
halk04981
Folate transport and metabolism
Module
halk_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
halk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CUU95_03885 (glyA)
09102 Energy metabolism
00680 Methane metabolism
CUU95_03885 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CUU95_03885 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CUU95_03885 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CUU95_03885 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CUU95_03885 (glyA)
Enzymes [BR:
halk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CUU95_03885 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AYF33024
UniProt:
A0AAJ2VRK2
LinkDB
All DBs
Position
complement(831721..833034)
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AA seq
437 aa
AA seq
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MLQSNFSPKARLASYDSLLAEAIAEETVRQEAHIELIASENYTSQLVMEAQGTQLTNKYA
EGYPGRRYYGGCEFVDKVEALAIERACNLFSANYANVQPHSGAQANAAVFMALVKPGDTI
LGMSLAHGGHLTHGAAPNFSGKHYNAVQYGLKPETGEIDYEEVERLAREHQPKMIIAGFS
AYSRVVDWRRFRTIADEVGAYLMVDMAHVAGLVAANLYPSPLPHAHVVTTTTHKTLRGPR
GGLILSADGDEALYKKLNGAVFPGQQGGPLMHVIAAKAVAFKEAMSQEFVRYQQQVIDNA
QAMANVFMERGYDVVSGGTEDHLFLVSLIQQGVTGKDADAALGRAHITVNKNTVPNDPQS
PFVTSGLRIGTPAVTTRGFNAQECGELAGWICDILDVLAAGSDTAAIEAEVLAKVSDVCA
RHPVYAEAVAEAVESIA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaagtaatttttcccccaaagcacgtttggccagttacgacagtttgcttgca
gaagcaattgctgaagaaacggtacgccaagaagcgcatattgagctgatcgcctccgaa
aattacaccagtcaacttgtcatggaagcgcagggtacccaactgactaacaagtatgcg
gaaggctatccaggccgtcgctactacggcggttgtgaattcgttgacaaggttgaggcc
ttagccattgaacgtgcctgcaacttatttagtgccaattatgccaatgtgcagccgcat
tccggtgctcaggcaaatgccgctgtgttcatggcactcgtcaaacctggcgatactatt
ctaggtatgagccttgcccacggcggccatttaacccacggcgccgcccctaacttctcg
ggcaaacactacaacgctgttcagtacggcctcaagccggaaaccggtgagatcgattac
gaagaagttgagcgtttggcccgtgagcatcagccgaaaatgatcattgccggtttctct
gcctactctcgcgtggtggattggcgtcgtttccgcactatcgctgatgaagtgggtgct
tacttaatggtcgacatggcccacgttgcaggtttagtggcagctaacctttatccgagc
ccgctgcctcatgcccacgtcgtcaccacgactacccacaaaacgctgcgtggcccccgc
ggtggcctgattctgtctgcggatggcgacgaggcgctctacaaaaagcttaatggtgcg
gtcttcccaggccagcaaggtggcccattgatgcatgttatcgcggcgaaagcggtggcg
ttcaaggaagccatgagccaggagtttgtgcgttaccagcagcaggtgattgacaacgcc
caagccatggccaacgtattcatggagcgtggctatgatgttgtgtcgggtggtaccgaa
gatcatctgttcttagtctcgcttatccagcagggcgtcacgggtaaggatgcggatgcc
gcattgggccgcgcgcatatcaccgttaataagaacacggtgcccaacgacccgcagagc
cccttcgtgacatcgggtctacgtattggtacccccgcggttaccacgcgtggcttcaat
gcccaagagtgtggcgaactagctggctggatttgcgacatcctagacgtattagctgct
gggagtgataccgctgccatcgaggccgaggtgctggctaaagtgagtgacgtgtgtgcc
cggcaccctgtctatgctgaagctgtcgctgaagccgtcgaatctattgcttga
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