KEGG   Vreelandella alkaliphila: CUU95_04135
Entry
CUU95_04135       CDS       T05720                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K07713  two-component system, NtrC family, response regulator HydG
Organism
halk  Vreelandella alkaliphila
Pathway
halk02020  Two-component system
Brite
KEGG Orthology (KO) [BR:halk00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CUU95_04135
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:halk02022]
    CUU95_04135
Two-component system [BR:halk02022]
 NtrC family
  HydH-HydG (metal tolerance)
   CUU95_04135
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 AAA_5 AAA_2 AAA AAA_16 Mg_chelatase HTH_8 HTH_AsnC-type HTH_11 HTH_24 DUF603 AAA_22 AAA_7
Other DBs
NCBI-ProteinID: AYF33066
LinkDB
Position
885800..887185
AA seq 461 aa
MPRILIVEDEAIIRSALKRLLERHSYTVSEAGSAEEARELAPSEFDLVISDLRLPGDPGT
ALIEAAAPAPVLIMTSYASMRSAVDALKQGAVDYVAKPFDHTELLETVERILHKQSMQQG
TPPDITDEGGGRQTMIGNCTAMQQVYTRIRKTAPADVTVLIQGESGTGKELVARAIHQQS
KRAKAPLICVNCAAIPETLIESELFGHEKGAFTGASAARTGLVEAADGGTLFLDEIGELP
LDAQARLLRVLQEGEIRKIGSVETRHVDVRLIAATHRDLRALSKSGEFRLDLYYRLNVMQ
IELPPLRDREEDVLKIADILLDKACKRHDRQGLRLSRASRQDLRDYPWPGNVRELENALE
RGVILAEGHLIHPDDLGLGPVTNRPHSSAGNSSALANESSAPSGDDDDLSLEDYFQHFVL
EHQDQMSETELAQKLGISRKNLWERRQRLGIPRKKTARRPN
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgcccaggatactgattgttgaagatgaagcgattattcgcagcgcattaaagcgttta
ctcgaacgtcacagctataccgtcagcgaagcgggcagcgcagaagaagcacgtgagctg
gcgcctagcgagtttgatctagtcattagcgacctgcgactgccaggtgatcctggcacc
gccctaattgaggccgcagcacccgcgccggtactgataatgaccagctatgccagcatg
cgctcggcagtcgacgcgcttaagcaaggggctgtggactatgttgctaaaccatttgat
cacaccgagcttttagaaaccgtcgaacgcattctgcataagcagtcgatgcagcaaggc
acacctccggatatcaccgatgaaggaggtgggcgtcaaacgatgatcggcaattgcacg
gctatgcagcaggtttacacgcgcattcgcaaaacagccccggcagacgttaccgtgtta
attcaaggagaatccggcacaggtaaagagctcgttgcccgggccattcatcagcaaagc
aaacgcgccaaagcaccgctgatttgtgtgaactgcgcggcaatacctgagacgctgatc
gagtcagagctttttggacatgagaaaggagcgtttaccggcgctagcgctgcccgaacc
gggttagtggaagccgccgacggaggcaccctgtttttagatgaaatcggcgagttacca
ttggatgcccaggcgcgactgttacgcgtactccaggaaggtgaaatccgcaaaattggc
tccgtcgaaacacgccatgtggacgttcgcctgatcgccgccacccatagggacttgcgc
gctctgtcaaaaagcggggaattccgactagatctctactatcgcctcaacgttatgcag
attgaactgcctccgctgcgcgaccgtgaagaagacgtattgaagatagccgatatcctg
ttagataaagcctgcaaacgtcatgatcgccaagggcttcgtttgtcacgggcttcccga
caggatctacgcgactacccttggcctggtaacgtacgcgagcttgagaatgcactggag
aggggcgtaattctagccgaggggcatttgattcaccctgacgacctaggccttggccct
gttaccaatcgacctcactcttctgcaggtaacagctccgcattagccaatgaatcatca
gcgccaagtggggatgacgacgacctctcgctcgaggactatttccagcattttgtgctg
gaacatcaggatcaaatgagtgaaaccgagttggcccaaaaactggggattagtcgtaaa
aatttatgggagcggcgccagcgcctaggcattccacgtaaaaaaaccgcacgccgcccc
aattag

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