Vreelandella alkaliphila: CUU95_04140
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Entry
CUU95_04140 CDS
T05720
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
halk
Vreelandella alkaliphila
Pathway
halk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
halk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CUU95_04140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
halk03019
]
CUU95_04140
Enzymes [BR:
halk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CUU95_04140
Messenger RNA biogenesis [BR:
halk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CUU95_04140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AYF33067
UniProt:
A0AAJ2VR62
LinkDB
All DBs
Position
888077..889462
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AA seq
461 aa
AA seq
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MFKGFTRLLHSPGEHLKSLLDSPESAADALSPRIIPRSEHPVSRQQISEAALKVLYRLNG
AGFDAFLVGGCIRDALLGKMPKDFDVATNATPEQVRDLFRNSRLIGRRFRIVHVRFGREV
IEVTTFRGKPQDEHGDHIAQQSDDGLLLRDNVWGNIEEDALRRDFTVNALYYNIADFTIH
DFANGARDIESRTLRLIGDPVTRYREDPVRMLRAVRFAAKLDFTIEPATEEPMYDLAPLL
LQIPPARLFDEVLKLFMSGHGLITFRLLSHYNLFGMLFPEAEEAMADAAWAEDLIEQALT
NTDKRIAEGRPVTPAFLLAAFLWAPVAHRQAELEREGMPAIPALQTAAQQVVTRQLQHIS
IPKRFGMPMRDIWELQARLPLRRGKRAFQTREHPRFRAAYDLLLLREQAGEIPRGLGDWW
NAFQQGDEHEQLRLLQKVGSDPASQGDRRRKKRRKPRKTEQ
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaggatttacccgtttattacatagcccgggagagcacttgaaatccctgctc
gattccccagagagcgccgctgatgcgctcagtccccgtattattccgcgctccgagcac
cctgtttctcgtcagcaaatcagcgaggccgcgttaaaggtgctgtatcgccttaatggc
gctggatttgatgccttcctagttggcggctgcattcgtgatgcattgctgggcaaaatg
ccgaaagatttcgacgttgccacgaatgcaacgccggaacaggtgcgcgatctgtttcgc
aattcgcggctgattggtcggcgttttcgcattgtgcatgtgcgctttggtcgcgaagtc
attgaagttaccactttccgcggcaagcctcaggacgagcacggcgatcatatcgcccag
cagtctgacgatggcctgctattgcgagacaatgtgtggggcaacatcgaagaagacgct
ctacgccgcgacttcaccgtgaatgcgctttactacaatatcgctgacttcacgattcat
gactttgccaacggcgcgcgtgatattgagtcacgtacgctgcgactgattggcgacccc
gttacccgctatcgggaagacccagtacgtatgctgcgtgcggtgcgctttgcggccaag
ctcgatttcaccatcgagccagccactgaagagccgatgtatgatctagcgccgctgtta
ctgcaaattcctcccgcccgtttgtttgatgaagtactcaagctattcatgtcgggacac
ggcttaattactttccgcttactgagccattacaacttgtttggcatgctgttccccgaa
gcggaagaagccatggcggatgctgcttgggccgaagatctgattgagcaagcgctcact
aacaccgataagcgcattgcggaaggccggccagttacgccagcctttctgctagccgcc
tttttgtgggcgccagtggcacaccgtcaagccgagcttgagcgcgaaggcatgcccgca
attccagcgctgcaaactgccgcccagcaggtagtcactcgccagttacagcatatttcg
attcccaaacgctttggcatgccgatgcgcgatatttgggaactacaggcacgccttcct
ctgcgccgtggcaaacgggcatttcaaacccgcgaacacccacgcttccgagccgcctac
gatttgctgctgttgcgtgaacaagcaggtgaaataccgcgtggcttaggcgattggtgg
aatgccttccagcaaggtgatgagcacgagcaacttcggctgctgcaaaaagtgggaagt
gatccggcaagccagggggaccgtcgacgtaaaaaacgacgcaaaccacgtaaaacagag
cagtaa
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