Vreelandella alkaliphila: CUU95_04175
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Entry
CUU95_04175 CDS
T05720
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
halk
Vreelandella alkaliphila
Pathway
halk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
halk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CUU95_04175 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
halk03019
]
CUU95_04175 (pnp)
03016 Transfer RNA biogenesis [BR:
halk03016
]
CUU95_04175 (pnp)
Enzymes [BR:
halk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CUU95_04175 (pnp)
Messenger RNA biogenesis [BR:
halk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CUU95_04175 (pnp)
Transfer RNA biogenesis [BR:
halk03016
]
Prokaryotic type
tRNA degradation factors
CUU95_04175 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AYF33074
LinkDB
All DBs
Position
complement(894967..897129)
Genome browser
AA seq
720 aa
AA seq
DB search
MLKEVAVNPVKKTFQYGRSTVTLETGRIARQATGAVMVTMDETVVLCTVVAKKEANPNQP
FFPLSVHYQEKTYAVGKIPGGFFKREGRPTEKETLTSRLIDRPIRPLFPKGFMNEVQVIC
TVLSTDRNHDPDIAALLGTSAALGIAGVPFNGPIGAARVGFNEEQGYFLNPTVEELTTSE
LDMVVAGTENAVLMVESEAQELLEDEMLGAVLFGHQEMQVAVSAIKELVAEAGKPRWDWQ
PAQENVALKTAMADAFEAKVGDAYRITDKMARQDALSALKDEAVAQLATAEGEEVEGKFS
KDDVKGAFAGLEKRVVRSRAVKGEPRIDGRDNATVRPLAIEVGVLPKTHGSAVFTRGETQ
AIAIATLGTLRDSQLIESLEGERKDRFMLHYNFPPYCVGEAGFMGGPKRREIGHGRLARR
GVQAMLPSEDVFPYTIRVVSEITESNGSSSMASVCGSSLALMDAGVPLKAPVAGIAMGLV
KDEDGYAVLTDILGDEDHLGDMDFKVAGSEEGVTALQMDIKIEGINEEIMEKALQQAHDA
RLSILAQMNDVISQSRTDVSENAPSMATIKIDPDKIRDVIGKGGATIRKICEDTGASIDL
DDDGTVRIYAEDKAAAKKAIDTVLAITAEAEIGKLYNGKVVRIADFGAFVNIMPGTDGLV
HISQIVAERVNNVRDFLNEGDDVIVKVLDIDNRNRVKLSIKEITEEEKAAFAAAEADVAN
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaggaagtcgccgtgaatccggtaaaaaaaacgtttcaatacggtcgtagcacc
gtcaccctagaaactgggcgtattgctcgccaagccactggcgccgttatggtgaccatg
gatgaaaccgtcgtactgtgtacggttgtggctaaaaaagaagcaaaccccaatcagcct
ttcttcccactctcggtacactaccaagagaaaacctacgcagtgggcaagatccccggc
ggcttctttaagcgcgaagggcgtcctactgagaaagaaacccttacctcacgtctgatt
gatcgtccgatccgtccgctatttcctaaagggtttatgaacgaagtgcaggttatctgt
actgttctgtcgactgatcgtaatcatgaccctgatatcgcagccctactgggcacctcg
gcagcgctgggtattgctggtgtgccgttcaacggcccgattggcgcggcacgcgtgggc
tttaatgaagagcagggctacttcctaaacccaaccgttgaagagctgactacctcagag
ctggacatggttgttgctggtaccgaaaacgccgtattgatggtggagtcggaagctcag
gaactgcttgaagacgaaatgcttggtgccgtgctgtttggtcaccaagaaatgcaggta
gccgttagcgcgattaaagagctggtcgctgaagctggcaaaccgcgttgggattggcag
cctgctcaagaaaatgtagcactgaaaacggccatggccgatgcctttgaagccaaggta
ggtgatgcttatcgcattactgacaaaatggctcgtcaagatgcgctgtcagcgctgaaa
gatgaagcggttgcacagttggccactgctgaaggcgaagaagtagaaggtaagttcagc
aaagatgacgtgaaaggtgcgtttgctggccttgaaaagcgcgttgtacgctctcgtgcc
gtaaaaggcgagccccgtatcgatggacgcgacaatgccactgtacgtcctctagcgatt
gaggtgggtgtactgcctaagacacacggttcggcagtatttacccgtggtgaaactcag
gccatcgccattgctaccttgggcaccctgcgcgattcgcagctgatcgagtccctggaa
ggtgagcgtaaagaccgctttatgctgcactacaacttccctccttactgtgttggtgaa
gccggctttatgggcggcccgaagcgtcgcgaaattggccatggccgtttagcacgccgt
ggcgttcaagcgatgctgccgtcagaagacgttttcccctataccatccgtgtggtatcg
gaaatcaccgaatctaacggttctagctccatggcgtcagtgtgcggctcctcgctcgcg
ctgatggatgctggtgtaccattaaaagcaccggtggcaggtattgccatgggcttggtg
aaagatgaagacggctatgcggtattgaccgatatcctgggtgacgaagatcacctgggc
gatatggacttcaaagttgccggttctgaagagggcgttactgctctacagatggacatt
aagattgaaggcatcaatgaagagatcatggagaaagcgctgcagcaggctcatgatgct
cgcctcagtatccttgctcagatgaacgacgtgatcagtcaaagtcgtaccgatgtgtcg
gagaatgctccgtctatggcgacaatcaaaattgatccggacaagattcgtgatgtgatc
ggtaaaggcggcgcgacgattcgtaaaatttgcgaagataccggcgcttctattgatcta
gatgatgatggcaccgtgcgcatctacgccgaagataaagccgcagccaaaaaagcgatc
gataccgtgctggcaattaccgcagaggcggaaattggtaagctttataacggtaaagta
gttcgcattgcggactttggcgctttcgttaatatcatgccgggtaccgacggcttggtt
cacatatcgcaaattgttgccgagcgcgttaacaacgtgcgcgacttcttaaatgaaggc
gatgatgtgattgtgaaagtattggatatcgacaaccgcaatcgtgtgaaactctcaatc
aaagagatcaccgaggaagagaaagcagcttttgccgctgccgaggcggacgtcgctaac
taa
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