Vreelandella alkaliphila: CUU95_04185
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Entry
CUU95_04185 CDS
T05720
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
halk
Vreelandella alkaliphila
Brite
KEGG Orthology (KO) [BR:
halk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
halk03016
]
CUU95_04185
Enzymes [BR:
halk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CUU95_04185
Transfer RNA biogenesis [BR:
halk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CUU95_04185
Prokaryotic type
CUU95_04185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AYF33076
LinkDB
All DBs
Position
complement(897656..898576)
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AA seq
306 aa
AA seq
DB search
MARRRRGLPVNGVLLLDKPKGISSNHALQRVRRLFEAQKAGHTGTLDPMATGLLPICLGE
ATKFSAHLLEADKMYRTRVELGVITDTGDAEGTVIEQREIPRLTAEDVESVLARFHGEID
QVPPMYSALKHQGKKLYELAREGKHVERAARRVSVYDARLLAFEGTAFEIEVSCSKGTYI
RTLAEDIGHALGCGAHISQLRRLKTGPFTGDAMWTLEGLEALADQATREAELMPADVLVD
HLPSLTVDETAYGRLAHGQSASLAIGVLEPDALARLYYAETFIGLGVVKGAQEVAPKRLL
STVAIS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtcgccgtcgcggattgccggttaatggcgtgttgctgctggataagcctaag
ggcatttccagcaatcatgcgctgcagcgtgtgcgtcgtctgtttgaggcgcaaaaagcc
ggtcataccggcacgctggaccctatggcaacgggcttgttacctatttgccttggggaa
gctactaagttttccgcgcacctgttagaagccgacaagatgtatcgcacccgtgttgaa
ctgggcgtgattacagacaccggtgatgccgaaggcacggtcattgagcagcgcgagatc
ccccgcttaacggccgaggatgtcgagtcagtcctagctcgctttcacggcgagattgac
caagtgccgccgatgtattcggcattgaagcatcaaggcaaaaagctttatgagcttgcc
cgtgagggtaagcacgttgagcgtgcagcgaggcgagtaagcgtgtatgatgcgcggctg
cttgctttcgagggcactgcctttgagattgaagtcagctgcagcaaaggcacgtatatt
cgcaccttggctgaagatattggtcatgcgctgggctgtggtgcccacattagccagttg
agaaggctcaaaacggggccctttaccggcgatgcaatgtggacgctggagggtcttgag
gcgctggcagaccaggccacccgcgaggctgaactaatgcctgcggatgtgctggttgat
catttgccgtcgctgacggtggatgaaacggcttacgggcgtcttgcacacggccaatcg
gctagcttagccattggtgtacttgagcctgatgcgctggcaagactttattacgctgag
acgtttatcggccttggcgttgtaaaaggggcgcaggaagtagctcccaagcggctgtta
agtaccgtcgctatctcgtaa
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