Vreelandella alkaliphila: CUU95_08440
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Entry
CUU95_08440 CDS
T05720
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
halk
Vreelandella alkaliphila
Brite
KEGG Orthology (KO) [BR:
halk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halk03400
]
CUU95_08440
Enzymes [BR:
halk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CUU95_08440
DNA repair and recombination proteins [BR:
halk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CUU95_08440
Prokaryotic type
CUU95_08440
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AYF33853
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All DBs
Position
complement(1828234..1829814)
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AA seq
526 aa
AA seq
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MAKAPIQVVWFKRDMRIHDHAPLSSASAAGPVLPVFAIEPGQWQTPDSALRHWQFAADAL
IDLSNALETIGLPLCIWQGDIVDLLNALKAHYGHIALHSHQETGNAWSFERDKQVHAWCQ
TNGVAWREARQHGVVRGLSSRSGHQTHWESHWETLMSASTCHAPQSAQAAPGWEAFHHLN
AEQLPTLTLGFDTTPCPQRQRGGRNEGRALWRSFVQARGRRYRGSLSKPLLAWEFGSRLS
PHLAWGTLSMREVVQSLRRQRQKHADDTAWARSLRAFTSRPYWHCHFIQKLESEPSIEHQ
TLHPALRGLRERDPSHPKLIAWKNGQTGVPLVDACMRSLIATGWLNFRMRAMLISHATFG
LGLHWYEPALHLARLFTDFEPGIHYPQVQMQAGATGTNALRVYNPIKQAEDNDPTGKFVA
RWVPELAPLPLEWRAKPWALPESLRQRFGFHPGVDYPITNDFEAEARHWKKLLYELRRTP
EARESSRAIVDKLASQRRLPAQRSKKAKPANRQQLSLFGDDGLGDT
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggcacccatccaggtcgtttggttcaaacgcgatatgcgcattcatgatcat
gcgccgctttccagtgcatcggcggctggccctgtgctgcctgtttttgcgattgaacct
ggccagtggcaaacacctgatagcgccctgcgccactggcagtttgccgctgacgctcta
atcgacctttccaacgcactggagaccattggcctaccgctatgtatttggcaaggtgat
attgtcgatttgctgaacgccctaaaagctcactacggccacattgcccttcactctcat
caggaaacgggcaacgcctggagctttgagcgggataaacaggtgcatgcttggtgccaa
accaacggtgtagcttggcgggaagcccgccagcacggtgtagtacgaggacttagcagc
cgctctgggcaccaaacccattgggagagccactgggaaacgctgatgtctgcctcgacc
tgccacgcgccgcaaagcgcccaagcagccccaggctgggaagcctttcaccaccttaac
gctgagcagctacctaccttaacgctgggatttgataccacaccttgcccccagcgccag
cggggcgggcgcaacgaaggccgcgcactgtggcgtagttttgtgcaagcacgcgggcgg
cgttatcgcggctcgctgtctaagccgctgttagcgtgggagtttggttcgcggctttca
ccgcatttggcctggggcacgctttccatgcgcgaagttgtccagtcgttacgccgtcag
cgtcagaagcatgccgacgataccgcctgggcccgctcactacgcgccttcacctcgcga
ccttactggcactgccactttattcagaagttggaaagtgagccaagcatcgagcatcaa
acgctgcacccggcgctgcgcggcctgcgggagcgcgatcccagccaccccaaactcatt
gcctggaagaacggccaaaccggcgtgccgctagtcgatgcctgtatgcgcagtcttatc
gctaccggctggcttaactttcgcatgcgcgccatgctgatctcccacgccaccttcggc
ctggggctgcactggtatgaacccgcgctgcacttggcacgtctgtttaccgacttcgaa
ccgggcattcactacccccaggtgcagatgcaagcaggtgccaccggcactaacgcgctg
cgggtgtataacccgattaaacaagcggaggataacgaccccacaggcaagtttgtcgcc
cgctgggtgccagaactagcgcccctgcccttggaatggcgcgccaagccctgggcacta
cccgaaagcctacgccagaggttcggctttcatcctggcgtcgactaccccatcaccaac
gatttcgaagccgaagcgcgccactggaagaagctgctctatgaactgcgtcgcacgcca
gaggccagggaatccagccgagccattgtggataagctcgccagccagcggcgactgcca
gcccagcgctctaaaaaagcaaaacccgccaatcgccaacagctttcgctgtttggcgat
gacgggttgggtgatacctag
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