Vreelandella alkaliphila: CUU95_11035
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Entry
CUU95_11035 CDS
T05720
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
halk
Vreelandella alkaliphila
Brite
KEGG Orthology (KO) [BR:
halk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halk03400
]
CUU95_11035
DNA repair and recombination proteins [BR:
halk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CUU95_11035
Archaeal homologous recombinant proteins
CUU95_11035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AYF34303
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All DBs
Position
2411849..2414914
Genome browser
AA seq
1021 aa
AA seq
DB search
MTPLTLTMQAFGPFAGSETIDFTALGKSPLFLINGPTGAGKSSVLDAICFALYGQTTGND
RDAGQMRCDQAAASLLTEVSLDFRLRDSAYRVRRVPQQERPKATGEGTTTQSAEAQLWRL
TPEGDEDECLVARKVTDANSQLHALIGLDANQFRQVMVLPQGKFRELLLAESKDREKIFS
QLFQTQIFQRIEERLRTQANQIERAVNDHRQHISGILAGGELESEAALEQEVEALTPQVG
QARQRFETAQQQRRSAEQRRDEAQALQRQFEARDSLAAEKARHLEQQAQITTFQSRLTQS
DHAQALRPYSAALVQAQQALTTAQAEQRQADAALTTQRTNTEQAKRTFEAARQRQTELPA
LRERHRQLGEFIHKSQQLSELEARWQAAQTAWQQADGILKRDEAQLDGIRQQGEALSVTL
EQLQTESQQLASAPAELSRHESLLAQRQELEALMRQGRELVVQQQQATAALQGRRSEAEQ
AKRHATEQEMRWHQGQAALLALTLQEDAPCPVCGSLEHPAPAVQHADLVTQAQVEEARST
EEQARHALQTAEHQEQQLAQQFSYNTEQAQRLRHQLGDWASQPPFELQQACEQLRRQVAG
RQQVESEINRQSAARDELRSGWGTLDKQLKAQRPQVEKAKEEALRLESQRDQLSQSLPED
ARNPLAMRQTLTELDNQITELEQAWERAQQVLSTSETQQARAEEQLRSANQQLARSQQAL
EQAQAEWQTALQASSFESEAAFQAAQLEDNQRQDLARQVEAYQRRLAELDGALHNYHAQL
AEKTPPDLAALATLTEAAQAEEHTQLEAWRTLDGRLNTLQGIRQKLAAARAAQAELEAQY
RVWGTLSEVANGRTGNRISLQRFVLGVLLDDVLIQASERLVRMSRGRYQLVRREDPSKGN
KASGLELDVADTYTGKSRSVATLSGGESFMAALALALGLSDVVQAYAGGIQLDTLFIDEG
FGSLDQDALDQAIAMLSELQMGGRMIGIISHVSELKEQMPVRVEVRASRLGSSVEVKGAL
L
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgacaccgttaacgctcaccatgcaggcgtttggcccctttgctggcagcgaaacgatc
gactttactgcgctgggtaaaagcccgttgtttctgattaacggccccacgggcgcaggg
aagagctcggtattagatgccatctgttttgcgctttacggccagaccactggtaatgac
cgcgatgccgggcaaatgcgctgtgatcaagctgctgctagcttgttgaccgaggtgagc
ttggattttcgcctgcgcgatagtgcttaccgagtgcgccgggtgccccagcaggagcgt
cccaaggccactggtgaaggcactaccacacaaagtgctgaagcccagctgtggcggctg
accccggaaggtgatgaggatgaatgtttggtggcgcgtaaggtcactgatgccaacagc
caactgcacgctttaataggtctggatgctaatcaatttcgccaagtaatggtgctcccc
caggggaagtttcgtgaactgttgttagcggaatcgaaagaccgcgagaaaattttttcg
cagctatttcaaacccagatttttcagcgcattgaagagcgcctgcgtacccaggcgaat
caaatagagcgagcggtgaatgatcaccgccagcatatcagcggcattttggccgggggc
gagctggaaagcgaagcggcattagagcaagaagtagaggcgctaaccccgcaagtaggg
caagcgcgtcagcgttttgaaaccgctcagcagcagcgccgtagtgctgaacagcgacga
gatgaagcccaagcgttacagcgccaatttgaagcgcgggacagcctcgccgcagagaaa
gcacgccaccttgagcagcaagcgcaaataacgacctttcagagccgcttgacccaaagc
gaccacgctcaagcgctacgaccttacagtgctgcgttagtccaagcccagcaggcactc
actaccgcccaagcagagcagcgacaggctgatgccgcgctgactacccagcgaacgaat
actgaacaagccaagcgtacctttgaagcggcacgccagcgccagaccgaactacctgca
ctgcgcgagcgccatcgtcagttgggcgagtttatccacaaaagtcagcagttaagtgag
cttgaagcgcgctggcaagcggcacaaaccgcttggcagcaagccgatggcatacttaag
cgtgatgaagctcaattagacggtattcgtcagcaaggtgaagcgctaagcgttactctt
gagcagctgcaaacggaaagtcagcagttggccagcgcccctgcagagctgagccgccat
gagagcctgctagctcagcggcaggagttggaggcgctgatgcggcaggggcgtgaactt
gtcgttcaacaacagcaggcaacggcggcacttcaaggtcggcgcagcgaagcagaacag
gcgaagcgccacgcaactgagcaagagatgcgctggcaccaagggcaggccgcactgtta
gcgctcactctgcaagaagacgcgccttgcccggtgtgtggcagccttgagcatcctgcc
ccagcggttcagcatgctgatctagttacccaagcgcaggtagaagaagcccgctcgact
gaggaacaggctcgccacgccttacaaaccgccgagcatcaggagcaacagttagcgcag
cagtttagctataacactgagcaggcgcagcgccttcgtcaccagctaggcgattgggcc
agccaaccgccgtttgagctgcaacaggcctgcgaacaattgcgccgccaagtcgcgggt
cggcaacaggtcgagagtgagattaaccggcaaagcgctgcccgtgacgagctacgtagc
ggctggggcacgctggacaaacagctcaaagcccagcggcctcaggttgaaaaggccaaa
gaggaggcgttacggctagagagccagcgcgatcaattaagccaatcactgccagaagat
gcccgtaacccgttggccatgcgccaaacgctcactgaacttgataaccaaattactgag
cttgaacaggcctgggagcgtgcacagcaggtgctttcgacgagcgaaacccagcaggcg
cgggcagaagagcagctgcgcagcgcaaaccagcagctggcgcgtagccagcaagcgctt
gaacaggctcaggctgagtggcaaacggcgctacaagccagttcatttgaaagtgaagct
gcttttcaggcggctcagctagaggataaccaacggcaagacctggctcgccaagtagag
gcctatcaacgccggttggctgagcttgacggcgcgctacacaattaccacgcccaactg
gccgaaaaaacgccgccagatctcgccgcactcgccacacttaccgaagccgcccaagcg
gaggagcatacccaactcgaagcgtggcgaacactagatgggcggttaaatacgttgcag
ggtattcgccagaaacttgccgccgcccgtgcggcccaggccgagcttgaagcccagtat
cgggtgtgggggacattaagcgaagtggctaacgggcgcaccggtaatcgcattagcttg
cagcggtttgtgctaggagtgctgttggacgatgtactgatccaagcatctgaacggctg
gtgcgtatgagccgcgggcgctaccagttggtgcgacgcgaagacccatccaagggcaac
aaagcctcgggattggaattggacgtggccgatacctacaccggcaaaagtcgctcggta
gcgacgctttccggcggcgagtcgtttatggcggcgttggcgttggcactagggctttct
gacgtggtgcaggcctacgcaggcgggattcagttggatacgctatttattgatgagggc
tttggtagccttgatcaggatgcattagaccaagcgattgctatgctcagtgagttacaa
atgggcgggcgaatgatcgggattatctctcatgtcagcgaactcaaagagcaaatgcct
gtccgtgttgaagtgcgtgccagccgacttggtagctcggtggaagtgaagggcgcgctt
ctttaa
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