Vreelandella alkaliphila: CUU95_13765
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Entry
CUU95_13765 CDS
T05720
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
halk
Vreelandella alkaliphila
Pathway
halk03030
DNA replication
halk03430
Mismatch repair
halk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
halk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CUU95_13765 (holB)
03430 Mismatch repair
CUU95_13765 (holB)
03440 Homologous recombination
CUU95_13765 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
halk03032
]
CUU95_13765 (holB)
03400 DNA repair and recombination proteins [BR:
halk03400
]
CUU95_13765 (holB)
Enzymes [BR:
halk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CUU95_13765 (holB)
DNA replication proteins [BR:
halk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CUU95_13765 (holB)
DNA repair and recombination proteins [BR:
halk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CUU95_13765 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA_16
AAA
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AYF34815
LinkDB
All DBs
Position
3040915..3041898
Genome browser
AA seq
327 aa
AA seq
DB search
MAITGVLPWHQPTWQQLIRLSNEGRLPHALLISGAHGVGKQQLAEALIARTLCAQPGELA
CGHCHSCAMLASGYHPDLMRISPEEGKRQIRIDPIRDVNRFVSQTAQQGGYRVIVISPAE
AMNIAAANALLKSLEEPGDKTLFILLSDVPSRTLPTIRSRCQQWPLASVPFEDCRGWLTE
KLGGDEAHFWWRVSGGLPLLAVELATPEERALRHQIHDSFEQLVRGAEPVSEAARLDRQA
IDAILWYGIAWLEDLIRLGLSGETSVLHNPDLEPLYRQAMKNGRVQDWFRLLDYAREQRR
LFAVGANPNPQLVLEAWLVRWSALLRS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcaataacgggagtgctgccttggcatcagccgacgtggcagcagttgattcgcctt
tccaatgaagggcgactgccgcatgcgctgttaatcagcggtgctcacggagttggcaag
cagcagttggcggaagcgttgattgctcgaacgttatgcgcacagcctggcgagctagcc
tgtggccactgccatagctgcgccatgttggcttcaggctaccaccccgacttgatgcgc
atttctccagaagagggtaagcgtcagattcgcattgaccccatacgtgatgtaaaccgc
tttgtttcgcaaaccgcgcagcagggtgggtatcgtgtgatcgtgatctctcccgcggaa
gcaatgaatattgcagcggcaaacgcactgctcaaaagccttgaagagcccggcgataaa
acgctatttattctgctgtcagacgtgccttcgcgcacgctgcctacgattcgctcccgc
tgtcagcagtggccattagccagtgttccctttgaggattgccgaggctggttgactgaa
aaactcggcggcgacgaagcacatttttggtggcgagtgtcgggtggtttgccgctgctt
gctgtggagttggcaacgcctgaggagcgcgctcttcgccatcaaattcatgacagtttc
gagcagttagtgcgtggtgctgagcctgtttcagaagctgccaggcttgatcgtcaggcc
attgatgccatcttgtggtacggtattgcttggcttgaagacttgatccggctgggtttg
tctggcgaaacctcggtgctgcataaccccgatttagagccgttataccgtcaagcgatg
aaaaatggacgggtgcaggattggttccgattactggattatgctcgagagcagcgccgt
ttattcgcagtcggcgctaacccgaaccctcagctagtgcttgaagcgtggctggtacgc
tggtcggcgctgttacgctcctag
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