Vreelandella alkaliphila: CUU95_15605
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Entry
CUU95_15605 CDS
T05720
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
halk
Vreelandella alkaliphila
Pathway
halk03030
DNA replication
halk03430
Mismatch repair
halk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
halk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CUU95_15605
03430 Mismatch repair
CUU95_15605
03440 Homologous recombination
CUU95_15605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
halk03032
]
CUU95_15605
03400 DNA repair and recombination proteins [BR:
halk03400
]
CUU95_15605
Enzymes [BR:
halk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CUU95_15605
DNA replication proteins [BR:
halk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CUU95_15605
DNA repair and recombination proteins [BR:
halk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CUU95_15605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AYF35157
LinkDB
All DBs
Position
3428253..3429638
Genome browser
AA seq
461 aa
AA seq
DB search
MSNPPLIFIDVETTGTRATRDRITEIAALKVVNEHITDRWVSLINPGTSVPSHISQLTGI
YDDMLIDAPSFQTIAHSLREWLGEDCLVAHNARFDASFLRNEFKRADITYQPLLRCTLRI
SRRLIPELPKHNLRALLAHFNIPQARQHRAEDDATALWKLWETWQQQYDAASWQAALADE
QRHRSLPAHLPSEQLTGLPASPGVYLFYGHNRLPLYVGKSINLRSRVLGHFQRDHQDDKE
MRLAQQIQHIEWEETAGDLSAQLREAQLVKELMPIMNRQLRRQGHLKTWYWPTDQPCPTL
VSGKAISQPQPGKLFGLFRSAKEAKDALRNIAETHQLCPQALGIDKGTGRCFANQLGKCR
GACCGQEPLENHTQRAQEALASFQVKTWPWPGRIIIREKSRKNGPTSHHVVDHWCYLGSA
TTKQRALGLKGVTAKFDVDTYRILNRFLREPERHNLTVLPL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaccctccactgatatttattgatgttgagacgacgggcacccgtgcgacgcgt
gaccgcattactgaaattgctgccttaaaggtagtcaatgaacacataacggatcgctgg
gtcagcctgattaatcctggcaccagcgtgccttctcacattagccagctcaccggcatt
tatgatgacatgttgattgatgcgccctcttttcagaccattgcgcacagcttgcgcgaa
tggctcggtgaagactgcctcgtagcccacaatgcacgctttgatgccagctttctgcgc
aacgagttcaagcgtgccgatattacctatcagccgctactccgctgcacactgcgcatt
tcccgccgcttaatacctgaactgcccaagcacaatctccgcgccttattggcgcatttc
aacattccacaagcccgccagcatcgggcagaggatgatgccactgcgctttggaagctg
tgggaaacctggcagcagcagtatgacgctgccagttggcaagccgctctagccgatgag
cagcgccaccgaagcctgcccgcacatttacccagtgagcaactaaccgggcttcctgct
tcaccaggggtttatttgttttatggtcacaaccgccttcccttgtacgttggcaaaagc
attaatttacgcagccgcgtgcttggccatttccagcgcgaccaccaggacgacaaagag
atgcgccttgcccagcaaatacagcacattgagtgggaagaaaccgctggcgatttaagc
gcccagctaagagaagctcaactagtcaaagagctgatgccgattatgaaccgacagtta
cgccgtcaggggcatttaaaaacgtggtattggccaaccgatcaaccttgcccaacgctg
gtcagcggcaaagccatcagccagcctcagccgggaaagctatttgggctgtttcgaagt
gccaaagaagctaaagatgcgctgcgcaatattgccgaaacacatcagctttgtccgcaa
gcgctaggaatagataagggaacaggacggtgttttgctaatcagttaggcaagtgtcga
ggcgcctgctgtggacaggagccacttgaaaaccacacgcagcgtgctcaagaagcacta
gcatcttttcaagtaaaaacatggccttggccggggcgaattattattcgcgagaaaagc
cgtaaaaatggcccaactagccaccatgtggtcgatcactggtgctatttaggcagcgcc
acgaccaaacagcgtgccttggggctaaagggagtcactgctaaatttgatgtggatact
tatcgcatcctaaaccgttttttacgcgaaccagagcggcacaacctgacggtgctgccg
ctctag
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