Vreelandella alkaliphila: CUU95_17780
Help
Entry
CUU95_17780 CDS
T05720
Name
(GenBank) TetR family transcriptional regulator
KO
K22108
TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
Organism
halk
Vreelandella alkaliphila
Brite
KEGG Orthology (KO) [BR:
halk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
halk03000
]
CUU95_17780
Transcription factors [BR:
halk03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
CUU95_17780
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_24
TetR_N
TetR_C_4
HTH_Tnp_1_2
Motif
Other DBs
NCBI-ProteinID:
AYF35554
LinkDB
All DBs
Position
complement(3897837..3898400)
Genome browser
AA seq
187 aa
AA seq
DB search
MNASPRRKELTRLAAQLFVQEGFDRTTVRMLAQEMGIKSGSLFHHFKDKQEILAAVIEEG
TQNALSIAKAALQECDNDPEARLHAMARAHLETLFADRNAHVVALFEWRRLDPDASAHLS
HLRDAYEALWVEVIDDALAAELIHGDRFLVSRFILGALNWTVRWYDPSGPRTPDDLADEL
VAMIMAH
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcttcccctcgccgcaaggaattgacacgtttagcggctcagctattcgtccaa
gaaggctttgatcgcaccacggtgcgtatgctggcgcaagaaatgggtatcaagtctggc
agcttgttccatcacttcaaagataagcaggaaatcttagctgcggtaatagaggagggt
acccagaatgctcttagcattgctaaagcagcgcttcaagagtgcgacaatgatcctgag
gcgcgtctgcatgctatggcccgagcgcacttagagacgcttttcgctgatcgcaatgcc
catgtggtcgcgttatttgaatggcgacggttagatccagatgcgagtgcccatttaagc
cacctgcgggatgcttacgaagcactatgggtagaggttatcgatgatgcgctagcagca
gagcttattcacggtgaccgctttcttgtatcgcggtttatattgggtgcgctgaattgg
acggtacgctggtacgaccccagtgggccgcgcacacccgatgatctagccgatgagctg
gtcgcgatgattatggcccattaa
DBGET
integrated database retrieval system
