Vreelandella alkaliphila: CUU95_17940
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Entry
CUU95_17940 CDS
T05720
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
halk
Vreelandella alkaliphila
Pathway
halk03030
DNA replication
halk03430
Mismatch repair
halk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
halk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CUU95_17940
03430 Mismatch repair
CUU95_17940
03440 Homologous recombination
CUU95_17940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
halk03032
]
CUU95_17940
03400 DNA repair and recombination proteins [BR:
halk03400
]
CUU95_17940
Enzymes [BR:
halk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CUU95_17940
DNA replication proteins [BR:
halk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CUU95_17940
DNA repair and recombination proteins [BR:
halk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CUU95_17940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_16
AAA_5
AAA_14
AAA_18
AAA_30
AAA_2
AAA_19
Mg_chelatase
nSTAND3
Rad17
AAA_28
DUF4123
TsaE
AAA_24
NTPase_1
Herpes_Helicase
SKI
Motif
Other DBs
NCBI-ProteinID:
AYF35580
LinkDB
All DBs
Position
complement(3931070..3933061)
Genome browser
AA seq
663 aa
AA seq
DB search
MSYQVLARKWRPRTFHELVGQAHVQRALVNALDQGRLHHAYLFTGTRGVGKTTLARILAK
CLNCTANGRGNEGITSTPCGQCDSCRAIDEGRFVDLIEVDAASRTKVEDTRELLDNVQYA
PTQGRYKVYLIDEVHMLSTSSFNALLKTLEEPPPHVKFLLATTDPQKLPATVLSRCLQFT
LKHMPPERVVEHLTYVLGEEGVEYDESALWLLGKAAEGSMRDAMSLTDQAIAFGQGAIRH
ADVAAMLGTLDHRHVLALVEALADVDVQRLLAEVAQLSEQGPDFAAVLDELSAVLHRLAV
AQMVPDAVDNSHGDRALIQQLASRFTAEDIQLYYQIGIQGRGDMVHAPDLRSALEMTLLR
MLAFRPQGVPKPAATPLPLRREPSSDAVSQAAVSHEPVSHEPAAQVAASEDSYAPEPVSA
HESAAKKPEPALPSNQATMPDSAAVQASAAPGAADELSAPDAVSPEQAPPWSLDEVESAA
MLSSEPEPEPEPEPEPEPEPEPEPEPEPEPEPVSSEVPANAASSQVAADDRLDHAGWLAC
FSALGLGGLTRNLAAHCQLESDDGHTVVLRLDPGQSAMQADVHNGRIERALSSYGLPRRI
EFTVADLAPDLETPRQQEERQQKERHSLAVDLLHRDPNIQKLQQAFGATLIESTVKPASD
KRS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggttctggcccgcaaatggcggccgcgtacattccacgagctcgtgggc
caggcccatgttcagcgcgccttggtcaatgcgctcgaccaaggtcgtcttcaccatgcc
tacctatttacgggtactcgcggggtgggcaagaccacccttgcgcgtatcctggctaaa
tgccttaactgcaccgcaaatggccgcggtaatgaaggcattacctcgacgccttgcggt
cagtgcgacagctgtcgcgcgattgatgaaggtcggttcgttgacttgatcgaggtcgat
gctgcttcgcggacaaaggttgaagatacccgagagctgctcgataacgtgcagtatgcg
ccaacgcaaggacgctataaggtgtacctgattgacgaggtacacatgctgtcgaccagc
agtttcaatgcgctgcttaaaacgctggaagagccgccaccccacgtgaagtttctgctg
gccaccacagatccgcaaaagctgcccgctaccgtcctatcccgctgtttacagttcacg
cttaagcatatgccccctgaacgggtggtagagcacctaacctatgtgctgggggaggaa
ggggtcgagtatgatgagagcgctctgtggctgttaggtaaggccgcggaaggttctatg
cgcgatgcaatgagcctgaccgatcaagccattgcctttggccagggtgcgattcgccat
gcggatgtcgctgccatgctgggtaccttggatcatcgccatgtgttggcgctggtagaa
gcattggctgatgttgatgttcaacgactgctagccgaggttgctcagttatcggagcag
gggcctgactttgcagcagtattggatgaattaagtgcggttctgcatcgcttggccgtg
gcgcagatggtgcctgatgccgttgataatagccacggtgatcgagcgcttattcaacag
ctggcgagccgctttactgccgaggatattcaactctattaccagatcggcattcaaggg
cgcggcgacatggtgcatgcacctgatctgcgcagtgcgctggaaatgacgctgttgcga
atgctggcgtttcgccctcagggggtaccaaagcctgctgccacgccgcttccgctgcgc
cgcgaaccttccagtgacgctgtttcccaagccgcagtgtcgcatgagcctgtctctcat
gaacctgctgctcaggtagctgcatctgaggatagctacgcacctgaaccagtctctgct
catgagtcagcggcaaaaaagcctgagcctgcgctgccgagcaatcaggcaacaatgcct
gactccgccgcggtgcaggcgagtgctgccccgggggcagctgacgagttaagcgcgcct
gacgctgtttcaccagagcaagcgccaccctggtcgcttgacgaggtggagagtgccgcc
atgctttcttcagagccagagccagagccagagccagagccagagccagagccagagcca
gagccagagccagagccagagccagagccagagccagtttccagtgaggtgcctgccaat
gctgctagcagccaggtcgctgctgacgatcgtctagaccatgctggctggctggcatgc
ttcagtgcccttggattaggcggccttacccgtaatttggcagcgcactgtcagcttgaa
agcgatgatggccacacggtggtgctgcggcttgaccctgggcaatccgctatgcaggcc
gatgttcacaatggccgtattgagcgcgcgctaagtagttatgggctgcctcggcgtatc
gagtttacggtggctgacttagcgcctgatcttgaaacgccccgtcagcaggaagagcgt
cagcagaaagagcgccactcgttggctgttgatctattacaccgcgaccccaatatacag
aagctacagcaggcatttggggctactctcattgagtcaaccgttaaacccgcgtctgac
aagcgttcttag
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