Halomicrobium sp. LC1Hm: LC1Hm_0003
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Entry
LC1Hm_0003 CDS
T06261
Symbol
hYS2
Name
(GenBank) Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B
KO
K02323
DNA polymerase II small subunit [EC:
2.7.7.7
]
Organism
hall
Halomicrobium sp. LC1Hm
Pathway
hall03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LC1Hm_0003 (hYS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hall03032
]
LC1Hm_0003 (hYS2)
Enzymes [BR:
hall01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LC1Hm_0003 (hYS2)
DNA replication proteins [BR:
hall03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
D-family DNA polymerases
LC1Hm_0003 (hYS2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Metallophos
Metallophos_2
tRNA_anti-codon
tRNA_anti_2
DUF1249
Motif
Other DBs
NCBI-ProteinID:
QGA81074
UniProt:
A0A5Q0UHL3
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All DBs
Position
2981..4555
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AA seq
524 aa
AA seq
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MPLETPARLVSELASRGYNAEREAVTLLADAADPDVALDRALETIPDDTLVLSADHVRTA
LESEHDDDGGRSGNETRPTDETNPPDTDPSVSTGTDPTSSTDSGGSTPVETEGSSTVRSS
DPDQRSIEVHNDMTGQSTGTGEYSDFVSVFRDRYEKLSKQLRGRVNHRPTNALERMSGGE
EAAIVGMVSDIRSTASGHWLIELEDTNGTFPCLVMKDRAIADLVQELLYDEVIAVDGTLA
DDGGILFVDSLHFPDIPRTHDPSTADRPVQAALISDVHVGSQEFMADAWHRFADWLHTEE
AANVEYLLLAGDMVEGVGVYPDQDEELDVVDIYEQYERFSEYLKEIPGDIEVRMIPGNHD
AVRLAEPQPAFDEELRSIMTAHDAQVHSNPSLVTVEGVTVLMYHGVSLDEVIAELPDEKA
SYDEPHKAMYQLLKKRHVAPQYGGHTRLAPEDRDYLVMEEVPDVFHTGHVHKLGWGKYHN
VLAINSGCWQAQTDFQKSVNIDPDAGFAPILNLDTLDMTVRKFV
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
gtgcccctggagacgccggcccgactcgtgagcgaactcgccagccgcggctacaacgcc
gaacgcgaggcggtgacgctgctcgccgacgccgccgatccggacgtggcgctcgaccgt
gcactggaaacgattcccgacgacacgctcgtcctctcggcagaccacgtgcgaacggcc
ctggagagcgagcacgacgacgacggtggccgatctgggaacgagacgcgtccgaccgac
gagacgaacccgccagatacggacccctctgtttcgactggaacggaccccacctcgtcg
accgattccggcgggtcgactccagtcgaaacggaggggtcttcgacggtccgctcgtcc
gatcccgaccagcgatcgatcgaggtccacaacgacatgaccggtcagtcgaccgggacc
ggcgagtactcggatttcgtctccgtcttccgggaccgctacgagaagctctcgaagcaa
ctgcgcgggcgcgtgaaccaccgtcccacgaacgcgctcgaacggatgagcggcggcgag
gaggcggccatcgtcgggatggtctcggacatccgctcgacggccagcggtcactggctg
atcgaactcgaagacaccaacggcacgttcccgtgtctggtgatgaaagaccgcgctatc
gccgacctcgtgcaggaactgctgtacgacgaggtgatcgccgtcgacgggacgctggcc
gacgacggtggaatcctcttcgtcgactcgctgcacttccccgacatcccacggactcac
gatccctcgacggccgaccggccggttcaggcggcgctgatctcggacgtccacgtcggc
agccaggagttcatggccgacgcctggcaccgctttgccgactggctccacaccgaagaa
gccgccaacgtcgagtacctgctgctggccggcgacatggtcgagggcgtcggcgtctac
cccgaccaggacgaggaactcgacgtggtcgacatctacgagcagtacgaacgcttcagc
gagtacctcaaggagatccccggcgacatcgaggtccggatgatccccggcaaccacgac
gccgtccgcctcgccgagccccagccggctttcgacgaggaactgcgatcgatcatgacg
gcccacgacgcgcaggtccactcgaacccctcgctcgtcacggtcgagggcgtcacggtc
ctgatgtaccacggcgtctcgctggacgaagtgattgcggagttgcccgacgagaaggcc
agctacgacgaaccccacaaggcgatgtaccagctcctgaagaagcgccacgtcgcccct
cagtacggcggccacacccgcctcgcaccggaagaccgggactacctcgtgatggaggag
gtccccgacgtgttccacaccggccacgtccacaagctcgggtgggggaagtaccacaac
gtgctggcgatcaactccgggtgctggcaggcccagacggacttccagaagagcgtcaac
atcgacccagacgccgggttcgcgccgattctgaacctggacacgctcgatatgacggtg
cggaagttcgtctaa
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