Halomicrobium sp. LC1Hm: LC1Hm_0111
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Entry
LC1Hm_0111 CDS
T06261
Name
(GenBank) Holliday junction resolvase, archaeal type
KO
K03552
holliday junction resolvase [EC:
3.1.21.10
]
Organism
hall
Halomicrobium sp. LC1Hm
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hall03400
]
LC1Hm_0111
Enzymes [BR:
hall01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
LC1Hm_0111
DNA repair and recombination proteins [BR:
hall03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
LC1Hm_0111
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hjc
PDDEXK_15
NHL
Motif
Other DBs
NCBI-ProteinID:
QGA81180
UniProt:
A0A5Q0UJ58
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All DBs
Position
96738..97256
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AA seq
172 aa
AA seq
DB search
MVGSNAKGDRRERELVNALDEAGFAVMRAPASGSATERELPDVLAGDGEQFYAVEAKSSA
GDPIYLDGEEVEALLFFARNFGAKPRIGVRFDREDWFFFHPGDLYVTDGGNYRVKKETAL
AEGTDFDEFVGHSEKVTLAEIGDDDGPDQATLDVLAALDRGDLSVEDAAEML
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atggtaggctcgaacgccaaaggggaccgccgcgagcgcgaactcgtcaacgccttggac
gaggctgggttcgcggtgatgcgcgcgccggccagtggctcggcgaccgaacgggaactg
ccggacgtgctggccggcgacggcgagcagttctacgccgtcgaggcgaagtcgagcgcg
ggtgacccgatctacctcgacggcgaggaggtcgaggcgctgctctttttcgcccggaac
ttcggcgcgaagccccggatcggcgtgcgattcgaccgcgaggactggtttttcttccac
cccggcgacctctacgtcaccgacggcgggaactaccgcgtcaagaaggagacggcgctg
gccgagggcaccgacttcgacgagttcgtgggccacagcgagaaggtcacgctggccgag
atcggcgacgacgacggcccggatcaggcgacgctggacgttctggcggcactcgaccgg
ggcgatctgagcgtcgaagacgcggcggagatgctttaa
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