Halomicrobium sp. LC1Hm: LC1Hm_0219
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Entry
LC1Hm_0219 CDS
T06261
Symbol
dnaN
Name
(GenBank) DNA polymerase sliding clamp subunit (PCNA-like protein)
KO
K04802
proliferating cell nuclear antigen
Organism
hall
Halomicrobium sp. LC1Hm
Pathway
hall03030
DNA replication
hall03410
Base excision repair
hall03420
Nucleotide excision repair
hall03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LC1Hm_0219 (dnaN)
03410 Base excision repair
LC1Hm_0219 (dnaN)
03420 Nucleotide excision repair
LC1Hm_0219 (dnaN)
03430 Mismatch repair
LC1Hm_0219 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hall03032
]
LC1Hm_0219 (dnaN)
03400 DNA repair and recombination proteins [BR:
hall03400
]
LC1Hm_0219 (dnaN)
DNA replication proteins [BR:
hall03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
LC1Hm_0219 (dnaN)
DNA repair and recombination proteins [BR:
hall03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
LC1Hm_0219 (dnaN)
MMR (mismatch excision repair)
Other MMR factors
LC1Hm_0219 (dnaN)
TLS (translesion DNA synthesis) factors
Other TLS factors
LC1Hm_0219 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_N
PCNA_C
Motif
Other DBs
NCBI-ProteinID:
QGA81286
UniProt:
A0A5Q0UI56
LinkDB
All DBs
Position
201827..202570
Genome browser
AA seq
247 aa
AA seq
DB search
MFNAIVSADTLQATLDSVSVLVDECKIHLNEEGLEIRAVDPANVGMVDLTLEAAAFESYE
TDGGLIGVNLSRLEDIAGMADAGQLVHLELDEETRKLHIAIDGLEYTLALIDPDSIRQEP
DLPDLDLAAHVVIEGKDIDRAVTAADMVSDHIALGVDATDELFYVDAEGDTDDVHLELDR
EDLIDLTPGDAHSLFSLDYLQNMNKAIPKDAEVRMELGDEFPVKMHFDFAEGQGSVTYML
APRIQSE
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacgccatcgtgagcgcagacacgctccaggcgacactcgactccgtgagcgtg
ctggtggacgagtgcaagatccacctgaacgaggagggcctcgaaattcgcgccgtcgat
cccgcaaacgtcgggatggtcgatctcacactcgaagccgcagccttcgaatcctacgag
accgacggcggcctcatcggtgtcaacctctcgcggctcgaagacatcgccggcatggcc
gacgccggacagctcgtccacctcgaactggacgaagagacgcgcaagctccacatcgcc
atcgacgggctggagtacacgctcgcgctgatcgaccccgactcgatccgacaggagccg
gatctgccggatctcgacctggcggcccacgtcgtcatcgagggcaaagacatcgaccgt
gccgtcaccgccgccgacatggtctccgatcacatcgcgctgggtgtcgacgccaccgac
gaactgttctacgtcgacgccgagggcgacaccgacgacgtccacctcgaactcgaccgc
gaggacctgatcgatctcacgcccggcgacgctcactcgctgttctcgctcgactacctg
cagaacatgaacaaggcgatcccgaaagacgccgaggtccggatggagcttggcgacgag
ttccccgtcaagatgcacttcgacttcgccgagggacagggatcggtcacctacatgctc
gcgccgcgcatccagagcgagtaa
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integrated database retrieval system
