Halomicrobium sp. LC1Hm: LC1Hm_0224
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Entry
LC1Hm_0224 CDS
T06261
Symbol
mutS2
Name
(GenBank) DNA structure-specific ATPase involved in suppression of recombination, MutS family
KO
K07456
DNA mismatch repair protein MutS2
Organism
hall
Halomicrobium sp. LC1Hm
Pathway
hall03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LC1Hm_0224 (mutS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hall03400
]
LC1Hm_0224 (mutS2)
DNA repair and recombination proteins [BR:
hall03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LC1Hm_0224 (mutS2)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HHH_5
MutS_V
HHH
DUF4407
DUF6432
DUF3173
Motif
Other DBs
NCBI-ProteinID:
QGA81291
UniProt:
A0A5Q0UIR8
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Position
206541..208559
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AA seq
672 aa
AA seq
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MELESVSGVGEKTAAALAELDDPERALREGDVATLAQAPGISEGRAARIARAAIRDEHDD
PGGWAATSRAREIYREALGLLQDRTVTDYAEKRLETIYPSVVPERIAAVRERARAAMERE
PDEAVLDALSAVEPLADPSDVRVRDRCLATTDAERYAEAQAAIPEVTVEVVDDARQLAEL
GRSYATVVALDESFAGLDVDGDVRVQPDALENPADVVPERPLAFFTRNRDRIRAAVAVHR
VADLDAPYDLDALESALDRLAEDGGVRGDDELDRLTVAVDDLDAAVSTAESAANDHLREA
IEERDVTIEGTDLLSLVERGAGVDSLLSRELADEYDAAVAKARDRLIETLGLTDTEAVAR
RAFPDDPTYPVEHNEEAVSRLREELTAARDQRATRLKRELADDLAEMRGAAETLVETALE
LDVELAIARFAADFDCTMPEVGGVGGTGDDPGFAIEGGRSPLLDVAFEAVEPVDYRVDGV
ALLSGVNSGGKTSTLDLVALVTTLAHMGLPVPAEHARIGRVRELHYHAKTQGTLDAGAFE
ATLRDFGALVEGVDGSPGDARAGRVMVLVDELESITEPGAAATIVAGILEALAERDATGV
FVSHLAGDIIEAADAELSVDGIQAEGLVDGELRVNRSPVKGTLARSTPELIVEKLADDAE
GDFYGDLLGKFE
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggagctcgaatcggtctccggcgttggggagaagacggcggcggcactggccgaactc
gacgaccccgagcgggcgcttcgcgagggggacgtggcgacgctggcccaggccccgggg
atcagcgagggacgggccgcccggatcgcgcgagcggccatccgggacgaacacgacgac
cccggcgggtgggccgcgacgagtcgcgcacgcgagatctatcgggaagcgctggggctc
ttgcaggaccggaccgtcaccgactacgccgagaagcgcctggagacgatctatcccagc
gtcgtccccgagcgcatcgcggccgtccgggagcgagcgcgggcggcgatggaacgcgaa
cccgacgaggcggtcctcgacgcgctgtcggccgtcgaaccgctggcagatcccagcgac
gtgcgcgtccgagaccggtgtctggcgacgaccgacgccgagcgctacgccgaggcacag
gcggcgatcccggaagtcaccgtcgaggtggtcgacgacgccagacagctcgcagagctg
ggtcgcagctacgcgaccgtcgtcgccctcgacgagtcgttcgccggcctcgacgtggac
ggtgacgtgcgcgtccagcccgacgcactggagaacccggccgacgtggtccccgagcgc
ccgcttgcgtttttcacgcgcaaccgggaccggatccgggcggccgtcgcggtacaccgt
gtggccgacctcgatgccccctatgatctggacgccctggagagcgcgctggaccggctc
gccgaagacggcggcgtgcgaggcgacgacgaactcgatcggctgaccgtcgccgtcgac
gacctcgatgcggcggtctcgacggccgagtccgccgccaacgaccacctccgggaggca
atcgaagagcgagacgtgaccatcgaggggacggacctgctctcgctcgtcgagcgaggg
gccggagtggactcgctgctgtccagagagctggcagacgagtacgacgccgccgtcgcg
aaggcccgcgaccgcctgatcgagacgctgggcctgacagacaccgaggcggtcgcacgg
cgggccttccccgacgatccgacctaccccgtcgaacacaacgaggaggccgtctcgcgc
ctgcgcgaggaactgactgccgcacgggaccagcgcgccacgcggctgaaacgggagctg
gccgacgacctcgccgagatgcgtggggccgccgagacgctcgtcgagaccgcgctcgaa
ctggacgtcgagctcgcgatcgcccggttcgccgccgacttcgactgtacgatgcccgaa
gtaggaggagtcggcgggaccggcgacgatcccggcttcgccatcgagggcgggcgctcg
ccgctgctcgacgtggccttcgaagccgtcgagcccgtcgactaccgcgtcgacggcgtg
gcgctgctgtcgggggtcaacagcggcgggaagacctcgacgctggatctggtggcgctg
gtgacgacgctggcccacatgggcctgcccgtcccggccgagcacgcccggatcggccgc
gtccgggaactgcactaccacgccaagacacaggggacgctggacgccggggccttcgag
gcgacgctgcgcgatttcggcgcgctggtcgagggcgtcgacgggagtccgggcgacgct
cgcgccggccgcgtgatggtgctggtcgacgaactggagtcgatcaccgagcccggcgcg
gcggcgacgatcgtcgccggcatcctcgaagccctcgcggagcgcgacgcgacgggcgtg
ttcgtctcgcatctcgcgggcgacatcatcgaggcggccgacgcggagctgagcgtcgac
ggcatccaggccgaggggctcgtcgacggcgagcttcgggtcaatcgctcgccggtcaag
ggcacgctggcccgctcgacgccggagctgatcgtcgagaagctggccgacgacgccgag
ggcgacttctacggcgacctgctcgggaaattcgagtag
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