Halomicrobium sp. LC1Hm: LC1Hm_0296
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Entry
LC1Hm_0296 CDS
T06261
Name
(GenBank) Sugar-specific transcriptional regulator TrmB
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
hall
Halomicrobium sp. LC1Hm
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hall03000
]
LC1Hm_0296
Transcription factors [BR:
hall03000
]
Prokaryotic type
Helix-turn-helix
Other families
LC1Hm_0296
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Gene cluster
GFIT
Motif
Pfam:
Regulator_TrmB
TrmB
Rrf2
HTH_IclR
MarR_2
HTH_Cmi2_C
Motif
Other DBs
NCBI-ProteinID:
QGA81362
UniProt:
A0A5Q0UI49
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Position
complement(271296..272369)
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AA seq
357 aa
AA seq
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MGESQIRETLSAFGLSTKEVDAYLAILQRGEATTRAVSEAAGVSQSYVYEIATALAERGL
VIVDESATPTKLRARPPQEAVDALSMHLSEFETAVESVYDQPAETAAGFEVVHASQTVER
RLERQLARAEREVFAIVPSNAFPAVADALADARERGLTVYCLLAGESAESHVAEMDDPGR
YAHVVRSWDGRPPLFVVRDALGGVLASHGMLTSRHGRGYALAFNQNEVASGFFGNYVSNV
WPMGEQRFVAEPPTLPATFELFRSGVTAAALHTTAGHDVVADLDVVATTDETARQFEGVP
IREVRQNLVEPVNNAFPIENSLVVETDDGLVSVGGQACGLGPYYEEYAAREVTIRDA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaagccagatcagggagacgctgtcggccttcggactctcgacgaaggaggtc
gacgcctacctggcaattctacagcggggggaagcgacgacccgggccgtctcggaggcc
gcgggcgtctcacagagctacgtctacgagatcgcgaccgcactggccgaacgcggactg
gtcatcgtcgacgagagcgcgacgccgacgaagctccgcgctcggccaccccaagaggcc
gtcgacgcgctgtcgatgcacctctcggagttcgagaccgccgtcgagagcgtgtacgat
cagccggccgagacggcggcggggttcgaggtcgtccacgccagtcagaccgtcgagcgc
cgcctcgaacgccaactggcgcgtgcggagcgagaggtcttcgcgatcgtcccgtcgaac
gcctttcccgccgtcgccgacgcgctcgccgacgcccgggagcggggactgaccgtctac
tgtctgctggccggcgagtccgcggagtcacacgtcgccgagatggacgatcccggccgg
tacgcacacgtcgtccggagctgggacggccgcccgccgctgttcgtcgtccgggacgcg
ctggggggcgtgctggcttcacacgggatgctcaccagccgccacggccggggctacgcg
ctcgcgttcaaccagaacgaggtcgcttctggctttttcggcaactacgtcagcaacgtc
tggcccatgggcgaacagcgcttcgtcgccgaaccaccgacgctgccggcgaccttcgag
ctgtttcgctcgggcgtgacggctgcggccctccacacgacggcgggccacgacgtcgtc
gccgacctcgacgtggtcgcgaccaccgacgagacggcccgtcagttcgagggggtcccg
atccgcgaggtgcgccagaacctcgtcgaaccggtgaacaacgcgttcccgatcgagaac
tcgctggtcgtcgagaccgacgacggactggtcagcgtcggcggccaggcctgcggcctg
ggaccgtactacgaggagtacgccgcccgcgaagtgacgatcagagacgcctga
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