Halomicrobium sp. LC1Hm: LC1Hm_0396
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Entry
LC1Hm_0396 CDS
T06261
Symbol
recA
Name
(GenBank) RecA/RadA recombinase
KO
K04483
DNA repair protein RadA
Organism
hall
Halomicrobium sp. LC1Hm
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hall03400
]
LC1Hm_0396 (recA)
DNA repair and recombination proteins [BR:
hall03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
LC1Hm_0396 (recA)
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Gene cluster
GFIT
Motif
Pfam:
Rad51
HHH_5
RecA
HHH
AAA_25
IMS_HHH
HHH_2
ATPase
Cdd1
HHH_8
RecR_HhH
IMS_HHH_1
AAA_22
SAM_BAF
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
QGA81460
UniProt:
A0A5Q0UJZ3
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Position
complement(357274..358323)
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AA seq
349 aa
AA seq
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MSTSEDLEELPGVGPATAEKLKDNGFDGYQGIAVASPGELSNTADIGESSAADIIQAARE
AADIGGFETGATVLERREQIGKLTWSVSEVDDLLGGGIETQSITEVYGEFGAGKSQVTHQ
ISVTVQLPAEHGGLEGSAIFVDSEDTFRPERIDQMVRGLDDDVLEDTMVLHGIVEEAGDA
DAGDEELLEALVESVLDKIHVAKAFNSNHQILLAEKAQEIASESQDDEFPVRLLCVDSLT
AHFRAEYVGRGELADRQQKLNKHLHDLMRVGDLNNTAVVVTNQVAANPDSFFGDPTQPIG
GNILGHTSTFRIYLRKSKGNKRIVKLVDAPNLPDGEAVMRVEEGGLMDE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgtccacatcagaggacctcgaagagctgccgggcgtcggtccggccacagcggagaag
ctcaaggacaacggcttcgacggctatcagggaatcgccgtcgcctcccccggcgagctg
tcgaacacggccgacatcggcgagtcgtcggccgccgacatcatccaggccgcccgagag
gccgccgacatcggcgggttcgagaccggcgcgaccgtcctggagcgtcgcgaacagatc
gggaagctcacctggtcggtctcggaggtcgacgacctgctgggcggtggcatcgagacc
cagtcgatcaccgaggtgtacggcgagttcggggccggcaagtcccaggtcacccaccag
atctccgtgaccgtccagctaccggccgagcacggcggtctggagggcagcgcgatcttc
gtcgactccgaggacacgttccggcccgagcggatcgatcagatggtgcgtggcctcgac
gacgacgttctcgaagacacgatggtcctgcacgggatcgtcgaagaagcgggcgacgcc
gacgcgggcgacgaggaactgctcgaagcgctcgtcgagtccgtcctcgacaagatccac
gtcgcgaaggcgttcaactccaaccaccagatcctgctggcagagaaggcccaggagatc
gccagcgagagccaggacgacgagttccccgtccgcctgctctgtgtcgactcgctgacg
gctcacttccgtgccgagtacgtcggccgtggcgaactggccgaccgccagcagaagctc
aacaagcacctccacgacctgatgcgcgtcggcgacctcaacaacaccgccgtcgtcgtc
accaaccaggtcgcggccaaccccgactccttcttcggcgaccccacccagcccatcggc
gggaacattctgggccacacgtcgacgttccgcatctacctccggaagtccaaggggaac
aagcggatcgtcaagctcgtcgacgcgccgaacctcccggacggcgaagcggtcatgcgc
gtcgaagagggcggcctgatggacgagtaa
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